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L2_022_103G1_scaffold_138

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_138_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..970)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7B0G0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47406.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC family transcriptional regulator
L2_022_103G1_scaffold_138_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1191..2699
DNA (1509bp) protein (503aa)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B0G1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47405.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter
L2_022_103G1_scaffold_138_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2699..3706
DNA (1008bp) protein (336aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7B0G2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47404.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter permease subunit
L2_022_103G1_scaffold_138_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3706..4980
DNA (1275bp) protein (425aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7B0G3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16994.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
monosaccharide-transporting ATPase
L2_022_103G1_scaffold_138_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5034..6221
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0G4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47402.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rhamnose ABC transporter substrate-binding protein
L2_022_103G1_scaffold_138_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6252..7823
DNA (1572bp) protein (524aa)
L-xylulose/3-keto-L-gulonate kinase (EC:2.7.1.53 2.7.1.-)
Carbohydrate kinase, FGGY family protein n=3 Tax=Lachnospiraceae RepID=A7B0G5_RUMGN
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EDN78631.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_103G1_scaffold_138_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7943..8257
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
rhaU; L-rhamnose 1-epimerase (EC:5.1.3.-)
L-rhamnose 1-epimerase n=3 Tax=Lachnospiraceae RepID=A7B0G6_RUMGN
L2_022_103G1_scaffold_138_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8258..9133)
DNA (876bp) protein (292aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TNE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67298.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_022_103G1_scaffold_138_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9300..10376
DNA (1077bp) protein (359aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=3 Tax=Lachnospiraceae RepID=A7B0G9_RUMGN
L2_022_103G1_scaffold_138_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10379..11989
DNA (1611bp) protein (537aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol dehydrogenase domain protein n=4 Tax=Clostridiales RepID=A7B0H0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67300.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_103G1_scaffold_138_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12001..12774
DNA (774bp) protein (258aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uronate isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U832_9FIRM
glucuronate isomerase
L2_022_103G1_scaffold_138_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13227..13988)
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17002.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, IclR family
L2_022_103G1_scaffold_138_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14222..15181
DNA (960bp) protein (320aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EDN78639.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EDN78639.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EDN78639.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H3_RUMGN
L2_022_103G1_scaffold_138_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15205..16230
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=3 Tax=Lachnospiraceae RepID=A7B0H4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17004.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_103G1_scaffold_138_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16419..17270
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolases (EC:4.1.2.40 4.1.2.13)
Ketose-bisphosphate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17005.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_103G1_scaffold_138_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17308..18318
DNA (1011bp) protein (337aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47391.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_103G1_scaffold_138_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18380..19906
DNA (1527bp) protein (509aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=3 Tax=Lachnospiraceae RepID=A7B0H7_RUMGN
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EDN78643.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_022_103G1_scaffold_138_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19903..20952
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.251)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BPA3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17008.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_022_103G1_scaffold_138_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20976..21908
DNA (933bp) protein (311aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-phosphofructokinase (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=3 Tax=Lachnospiraceae RepID=A7B0H9_RUMGN
L2_022_103G1_scaffold_138_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21928..22938
DNA (1011bp) protein (337aa)
Aldo/keto reductases, related to diketogulonate reductase (EC:1.1.1.21)
Oxidoreductase, aldo/keto reductase family protein n=3 Tax=Lachnospiraceae RepID=A7B0I0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47387.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_103G1_scaffold_138_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23063..23884
DNA (822bp) protein (274aa)
Transcriptional regulator, RpiR family n=3 Tax=Lachnospiraceae RepID=A7B0I1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47386.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulators
L2_022_103G1_scaffold_138_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24006..26312
DNA (2307bp) protein (769aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0I2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47385.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_138_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26329..27759
DNA (1431bp) protein (477aa)
Phosphotransferase system, EIIC n=4 Tax=Clostridiales RepID=A7B0I3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17013.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6)
L2_022_103G1_scaffold_138_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27934..29538
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPJ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47382.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_022_103G1_scaffold_138_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29542..31347
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNS8_9FIRM
L2_022_103G1_scaffold_138_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31328..32326
DNA (999bp) protein (333aa)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0I6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47379.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
periplasmic binding protein/LacI transcriptional regulator
L2_022_103G1_scaffold_138_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32653..33627
DNA (975bp) protein (325aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNX0_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ67360.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_022_103G1_scaffold_138_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33683..35179
DNA (1497bp) protein (499aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B0I8_RUMGN
L2_022_103G1_scaffold_138_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35192..36196
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UER3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67362.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_022_103G1_scaffold_138_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36331..37446
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67363.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Displaying items 1-30 of 66 in total

View Taxonomy