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L2_022_103G1_scaffold_156

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_156_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(637..849)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67820.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_103G1_scaffold_156_2
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1273..1482
DNA (210bp) protein (70aa)
Transposase n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AXR0_EUBCE
Transposase {ECO:0000313|EMBL:EIM58583.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
transposase
L2_022_103G1_scaffold_156_3
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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2425..2853
DNA (429bp) protein (143aa)
DNA-binding helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NG27_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC11063.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Phage transcriptional regulator, Cro/CI family protein
L2_022_103G1_scaffold_156_4
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3000..3848
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FG29_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEP20725.1}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
L2_022_103G1_scaffold_156_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3985..4530
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZF8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48529.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein conserved in cyanobacteria
L2_022_103G1_scaffold_156_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4707..4871
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48530.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phage integrase family.
L2_022_103G1_scaffold_156_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4868..5368
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48530.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phage integrase family.
L2_022_103G1_scaffold_156_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5355..5612
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYG0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20154.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Phage integrase family.
L2_022_103G1_scaffold_156_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5864..6958
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67551.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
AraC family transcriptional regulator
L2_022_103G1_scaffold_156_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7125..9071
DNA (1947bp) protein (649aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPE2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16690.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L2_022_103G1_scaffold_156_11
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9128..9997)
DNA (870bp) protein (290aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TP81_9FIRM
L2_022_103G1_scaffold_156_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10034..10702)
DNA (669bp) protein (223aa)
Phosphatidylserine synthase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=4 Tax=Clostridiales RepID=A7B8I7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49318.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_022_103G1_scaffold_156_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10699..11760)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49319.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_156_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11750..12460)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BNI6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49320.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PAP2 superfamily.
L2_022_103G1_scaffold_156_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12603..12776)
DNA (174bp) protein (58aa)
Toxin-antitoxin system, antitoxin component, HicB domain protein n=2 Tax=Lachnospiraceae RepID=A7B8I4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49321.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_156_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13558..15648)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=4 Tax=Clostridiales RepID=A7B8B9_RUMGN
L2_022_103G1_scaffold_156_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15868..16134)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=4 Tax=Clostridiales RepID=A7B8B8_RUMGN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
SSU ribosomal protein S15P
L2_022_103G1_scaffold_156_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16261..17568)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TW81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49324.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative glycosyl hydrolase
L2_022_103G1_scaffold_156_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17571..18830)
DNA (1260bp) protein (420aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Clostridiales RepID=A7B8B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49325.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
oxidoreductase
L2_022_103G1_scaffold_156_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18846..19709)
DNA (864bp) protein (288aa)
ABC transporter, permease protein n=4 Tax=Clostridiales RepID=A7B8B5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49326.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sugar ABC transporter permease
L2_022_103G1_scaffold_156_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19709..20629)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67562.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
putative ABC-type sugar transport system, permease component
L2_022_103G1_scaffold_156_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20718..22043)
DNA (1326bp) protein (442aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49328.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter binding protein
L2_022_103G1_scaffold_156_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22269..23525)
DNA (1257bp) protein (419aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49329.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
extracellular solute-binding protein
L2_022_103G1_scaffold_156_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23522..24592)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49330.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
chemotaxis protein CheY
L2_022_103G1_scaffold_156_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24580..26331)
DNA (1752bp) protein (584aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B8B0_RUMGN
helicase Ski2
L2_022_103G1_scaffold_156_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26340..27239)
DNA (900bp) protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=4 Tax=Clostridiales RepID=A7B8A9_RUMGN
L2_022_103G1_scaffold_156_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27242..28162)
DNA (921bp) protein (307aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=4 Tax=Clostridiales RepID=A7B8A8_RUMGN
L2_022_103G1_scaffold_156_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28184..29143)
DNA (960bp) protein (320aa)
DHHA1 domain protein n=4 Tax=Clostridiales RepID=A7B8A7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67569.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Exopolyphosphatase-related proteins
L2_022_103G1_scaffold_156_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29150..29521)
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=2 Tax=Clostridiales RepID=A7B8A6_RUMGN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ribosome-binding factor A
L2_022_103G1_scaffold_156_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29531..32098)
DNA (2568bp) protein (856aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U8V8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
bacterial translation initiation factor 2 (bIF-2)
Displaying items 1-30 of 52 in total

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