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L2_022_103G1_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_232_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..600)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25568.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AhpC/TSA family.
L2_022_103G1_scaffold_232_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(597..1505)
DNA (909bp) protein (303aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=U2BX89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25569.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1498..1644)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BFE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76849.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_022_103G1_scaffold_232_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1792..2469
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CKA3_9FIRM
Putative transcriptional regulatory protein CutR {ECO:0000313|EMBL:ERI76848.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_103G1_scaffold_232_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2466..3617
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA4_9FIRM
Signal transduction histidine kinase
L2_022_103G1_scaffold_232_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3625..3900)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25573.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4074..5336)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25574.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recombinase
L2_022_103G1_scaffold_232_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5724..5978)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BYE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76843.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_022_103G1_scaffold_232_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6079..7251)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25576.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7238..7444)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25577.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7648..8253
DNA (606bp) protein (202aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BFD1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI76839.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_022_103G1_scaffold_232_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8296..9369
DNA (1074bp) protein (358aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CLN3_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI68191.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
phage integrase family protein
L2_022_103G1_scaffold_232_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9690..11552)
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L947_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EXM40182.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
Protein of unknown function (DUF524)./Domain of unknown function (DUF2357).
L2_022_103G1_scaffold_232_14
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11581..14103)
DNA (2523bp) protein (841aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6HGV8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33244.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
hypothetical protein
L2_022_103G1_scaffold_232_15
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(14128..14337)
DNA (210bp) protein (70aa)
XRE family transcriptional regulator (EC:2.1.1.37)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036DB69D
Uncharacterized protein {ECO:0000313|EMBL:CDD27329.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_022_103G1_scaffold_232_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14451..14906)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CI75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76368.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L2_022_103G1_scaffold_232_17
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15024..15329
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67481.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Helix-turn-helix.
L2_022_103G1_scaffold_232_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15387..15632)
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=R0B4A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52820.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_19
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16086..17270)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59378.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_022_103G1_scaffold_232_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17260..17595)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01038.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_022_103G1_scaffold_232_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17598..18671)
DNA (1074bp) protein (358aa)
Phage integrase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1T7_9CLOT
Phage integrase {ECO:0000313|EMBL:CCY11033.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
site-specific recombinase XerD
L2_022_103G1_scaffold_232_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18674..18850)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A6NRY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47374.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_022_103G1_scaffold_232_23
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19171..19701
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59374.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Helix-turn-helix.
L2_022_103G1_scaffold_232_24
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19716..20555
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M5Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86953.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L2_022_103G1_scaffold_232_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20696..22237)
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU3_9FIRM
L2_022_103G1_scaffold_232_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22393..23025)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50774.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_022_103G1_scaffold_232_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23022..23657)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B8M4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52812.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_022_103G1_scaffold_232_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23727..24389)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI68159.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_022_103G1_scaffold_232_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24405..27623)
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT8_9FIRM
carbamoyl-phosphate synthase large subunit
L2_022_103G1_scaffold_232_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27616..28716)
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT7_9FIRM
Displaying items 1-30 of 47 in total

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