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L2_022_103G1_scaffold_260

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_260_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..633
DNA (633bp) protein (211aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=4 Tax=Erysipelotrichaceae RepID=B0N4J3_9FIRM
L2_022_103G1_scaffold_260_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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675..1454
DNA (780bp) protein (260aa)
Cof-like hydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N4J4_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:CCZ35040.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cof family hydrolase
L2_022_103G1_scaffold_260_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1529..2050
DNA (522bp) protein (174aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35039.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_260_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2160..2306
DNA (147bp) protein (49aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35038.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_260_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2309..3646
DNA (1338bp) protein (446aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Cysteine--tRNA ligase n=5 Tax=Erysipelotrichaceae RepID=B0N4J7_9FIRM
cysteinyl-tRNA synthetase
L2_022_103G1_scaffold_260_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3646..4023
DNA (378bp) protein (126aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Mini-ribonuclease 3 n=5 Tax=Erysipelotrichaceae RepID=B0N4J8_9FIRM
hypothetical protein
L2_022_103G1_scaffold_260_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4061..4786
DNA (726bp) protein (242aa)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Coprobacillus RepID=C3RMB5_9FIRM
23S rRNA methyltransferase {ECO:0000313|EMBL:CCZ35035.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
TrmH family RNA methyltransferase
L2_022_103G1_scaffold_260_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4803..5408
DNA (606bp) protein (202aa)
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Erysipelotrichaceae RepID=B0N4K0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCZ35034.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_260_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5618..5806
DNA (189bp) protein (63aa)
Preprotein translocase, SecE subunit n=5 Tax=Erysipelotrichaceae RepID=B0N4K1_9FIRM
Preprotein translocase SecE subunit {ECO:0000313|EMBL:CCZ35033.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_260_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5808..6365
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=4 Tax=Erysipelotrichaceae RepID=B0N4K2_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
transcription antitermination protein NusG
L2_022_103G1_scaffold_260_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6612..7394
DNA (783bp) protein (261aa)
LPXTG-domain-containing protein cell wall anchor domain n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ARL6_9FIRM
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EHM89891.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_260_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7381..7929
DNA (549bp) protein (183aa)
Glycosyl hydrolase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R2Y5_9FIRM
Glycosyl hydrolase {ECO:0000313|EMBL:CCZ35023.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_260_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7995..11192
DNA (3198bp) protein (1066aa)
Glycosyl hydrolase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5R2Y5_9FIRM
Glycosyl hydrolase {ECO:0000313|EMBL:CCZ35023.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_260_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11501..12931
DNA (1431bp) protein (477aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=R5RJU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35021.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
nlpC/P60 family protein
L2_022_103G1_scaffold_260_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12995..13468
DNA (474bp) protein (158aa)
Copper/zinc superoxide dismutase n=2 Tax=Erysipelotrichaceae RepID=B0N4K5_9FIRM
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CCZ35020.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_260_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13504..14325
DNA (822bp) protein (274aa)
Cof-like hydrolase n=5 Tax=Erysipelotrichaceae RepID=B0N4K6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDS18608.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
cof family hydrolase
L2_022_103G1_scaffold_260_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14433..15422
DNA (990bp) protein (330aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4K7_9FIRM
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDS18609.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
K+-dependent Na+/Ca+ exchanger related-protein
L2_022_103G1_scaffold_260_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15432..16121
DNA (690bp) protein (230aa)
Glycerophosphodiester phosphodiesterase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N4K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35013.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycerophosphoryl diester phosphodiesterase
L2_022_103G1_scaffold_260_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16311..18959
DNA (2649bp) protein (883aa)
Alcohol dehydrogenase, iron-dependent n=5 Tax=Erysipelotrichaceae RepID=B0N4K9_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
L2_022_103G1_scaffold_260_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19057..20316
DNA (1260bp) protein (420aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RMC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35003.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_260_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20717..22321
DNA (1605bp) protein (535aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=5 Tax=Erysipelotrichaceae RepID=B0N4L1_9FIRM
L2_022_103G1_scaffold_260_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22474..23961
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N4L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18614.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_022_103G1_scaffold_260_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24076..24888
DNA (813bp) protein (271aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18615.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_103G1_scaffold_260_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24974..25633
DNA (660bp) protein (220aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N4L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34999.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_260_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25651..26406
DNA (756bp) protein (252aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N4L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18617.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L2_022_103G1_scaffold_260_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26479..26961
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=5 Tax=Erysipelotrichaceae RepID=B0N4L6_9FIRM
L2_022_103G1_scaffold_260_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26928..28397
DNA (1470bp) protein (490aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Glutamate--tRNA ligase n=2 Tax=Coprobacillus RepID=G9R5E9_9FIRM
glutamyl-tRNA synthase
L2_022_103G1_scaffold_260_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28546..29391
DNA (846bp) protein (282aa)
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N4L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34994.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Transcriptional regulator
L2_022_103G1_scaffold_260_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29661..35501
DNA (5841bp) protein (1947aa)
F5/8 type C domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N4L9_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS18621.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase
L2_022_103G1_scaffold_260_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

35791..38493
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMD7_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS18622.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycosyl hydrolase
Displaying 30 items

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