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L2_022_103G1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_262_1
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CGF3_BIFBI
L2_022_103G1_scaffold_262_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(207..1580)
DNA (1374bp) protein (458aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GW38_BIFLN
carbamoyl-phosphate synthase small subunit
L2_022_103G1_scaffold_262_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1620..2183)
DNA (564bp) protein (188aa)
N utilization substance protein B homolog n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=NUSB_BIFLS
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
NusB antitermination factor
L2_022_103G1_scaffold_262_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2238..2804)
DNA (567bp) protein (189aa)
Elongation factor P n=9 Tax=Bifidobacterium longum RepID=EFP_BIFLD
elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_022_103G1_scaffold_262_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2936..3697
DNA (762bp) protein (254aa)
ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV8_BIFLS
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEY26163.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter
L2_022_103G1_scaffold_262_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3884..4348
DNA (465bp) protein (155aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV7_BIFLS
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:CEF10278.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_262_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4387..6342)
DNA (1956bp) protein (652aa)
Glycoside hydrolase, family 20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV6_BIFLS
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:KEY26164.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
glycoside hydrolase family protein
L2_022_103G1_scaffold_262_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6464..7582)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV5_BIFLS
hypothetical protein
Chromosome partitioning ATPase {ECO:0000313|EMBL:KFI73872.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_022_103G1_scaffold_262_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7771..10536)
DNA (2766bp) protein (922aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; DNA ligase; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
DNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=DNLJ_BIFLS
DNA ligase
L2_022_103G1_scaffold_262_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10601..14215)
DNA (3615bp) protein (1205aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV3_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:ACJ51833.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
hypothetical protein
L2_022_103G1_scaffold_262_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14313..16565
DNA (2253bp) protein (751aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPV2_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51832.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16552..17376)
DNA (825bp) protein (275aa)
Energy-coupling factor transporter ATP-binding protein EcfA3 {ECO:0000313|EMBL:CEE99778.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEE99778.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQQ6_BIFLS
ABC transporter ATP-binding protein
L2_022_103G1_scaffold_262_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17385..18644)
DNA (1260bp) protein (420aa)
Aminotransferase class I and II family protein n=2 Tax=Bifidobacterium RepID=T2I3Y3_BIFLN
Aminotransferase {ECO:0000313|EMBL:KEY26170.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
aminotransferase
L2_022_103G1_scaffold_262_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19036..19803)
DNA (768bp) protein (256aa)
Putative glucokinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU9_BIFLS
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACJ51829.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19901..20923)
DNA (1023bp) protein (341aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GW12_BIFLN
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:KEY26172.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_022_103G1_scaffold_262_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21166..21819
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B7GPU7_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51827.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21939..24371
DNA (2433bp) protein (811aa)
ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU6_BIFLS
Cobalt ABC transporter {ECO:0000313|EMBL:KEY26174.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter ATP-binding protein
L2_022_103G1_scaffold_262_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24443..24748
DNA (306bp) protein (102aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G839_BIFLO
hypothetical protein
Predicted RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:CBK69816.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_022_103G1_scaffold_262_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24847..25212)
DNA (366bp) protein (122aa)
Hypothetical membrane protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPQ5_BIFLD
Membrane protein {ECO:0000313|EMBL:KEY26176.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_022_103G1_scaffold_262_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25259..25936
DNA (678bp) protein (226aa)
TM2 domain containing protein+B7201 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU3_BIFLS
TM2 domain-containing protein+B7201
TM2 domain containing protein+B7201 {ECO:0000313|EMBL:ACJ51823.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26071..27057)
DNA (987bp) protein (329aa)
Phosphoglycerate dehydrogenase n=11 Tax=Bifidobacterium RepID=B3DPQ2_BIFLD
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KEY26178.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
serA1; sera1
L2_022_103G1_scaffold_262_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27385..28842
DNA (1458bp) protein (486aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU1_BIFLS
Major facilitator transporter {ECO:0000313|EMBL:KEY26179.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
major facilitator superfamily protein
L2_022_103G1_scaffold_262_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28848..30245)
DNA (1398bp) protein (466aa)
AAA ATPase, central domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPU0_BIFLS
recombination factor protein RarA
AAA ATPase, central domain protein {ECO:0000313|EMBL:ACJ51820.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30328..32895)
DNA (2568bp) protein (856aa)
Superfamily II RNA helicase n=4 Tax=Bifidobacterium longum RepID=D6DBF8_BIFLN
DEAD/DEAH box-like helicase {ECO:0000313|EMBL:BAP84001.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
helicase
L2_022_103G1_scaffold_262_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33029..34102)
DNA (1074bp) protein (358aa)
Polyphosphate kinase 2 family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2B6_BIFLN
Polyphosphate kinase {ECO:0000313|EMBL:KEY26182.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_022_103G1_scaffold_262_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34226..34507)
DNA (282bp) protein (94aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like esterase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVI7_BIFLJ
5'-nucleotidase
5'-nucleotidase {ECO:0000313|EMBL:KEY21679.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_022_103G1_scaffold_262_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34653..36185)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQP2_BIFLS
Phosphoesterase {ECO:0000313|EMBL:KEY26183.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_022_103G1_scaffold_262_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36283..37383)
DNA (1101bp) protein (367aa)
Glutamate ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPT6_BIFLS
ABC transporter permease {ECO:0000313|EMBL:KEY26184.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
polar amino acid ABC transporter inner membrane subunit
L2_022_103G1_scaffold_262_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37389..38066)
DNA (678bp) protein (226aa)
Glutamate ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPT5_BIFLS
glutamate ABC transporter permease component
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACJ51815.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_262_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38063..38902)
DNA (840bp) protein (280aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPT4_BIFLS
extracellular solute-binding protein, family 3
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY26186.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Displaying items 1-30 of 33 in total

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