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L2_022_103G1_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_270_1
unknown

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1..153
DNA (153bp) protein (51aa)

This feature has no annotations

L2_022_103G1_scaffold_270_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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350..1084
DNA (735bp) protein (245aa)
Cupin domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9L2_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EEF67355.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L2_022_103G1_scaffold_270_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1350..3641
DNA (2292bp) protein (764aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T4Y7_ROSHA
P-type HAD superfamily ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:AEN98426.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_022_103G1_scaffold_270_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3689..4522
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R4J9_9FIRM
L2_022_103G1_scaffold_270_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4739..5890
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Dorea formicigenerans RepID=B0G1S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR48443.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L2_022_103G1_scaffold_270_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5877..7142
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44279.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_022_103G1_scaffold_270_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7170..9026)
DNA (1857bp) protein (619aa)
Regulatory protein blaR1 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FST4_9FIRM
Regulatory protein blaR1 {ECO:0000313|EMBL:EEG94344.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Beta-lactamase
L2_022_103G1_scaffold_270_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9029..9409)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YN15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77319.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Predicted transcriptional regulator
L2_022_103G1_scaffold_270_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9527..10429)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4U9_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEG72717.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
LysR family transcriptional regulator
L2_022_103G1_scaffold_270_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10647..11246
DNA (600bp) protein (200aa)
Maltose O-acetyltransferase {ECO:0000313|EMBL:CCK96637.1}; EC=2.3.1.79 {ECO:0000313|EMBL:CCK96637.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Bacterial transferase hexapeptide repeat protein n=6 Tax=Clostridium difficile RepID=D5RWM7_CLODI
hypothetical protein
L2_022_103G1_scaffold_270_11
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11243..12121
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J1I2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT21603.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Protein of unknown function (DUF3737).
L2_022_103G1_scaffold_270_12
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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12139..13344
DNA (1206bp) protein (402aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JCJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28857.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L2_022_103G1_scaffold_270_13
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13508..17578
DNA (4071bp) protein (1357aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60659.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
glycosyl hydrolase family protein
L2_022_103G1_scaffold_270_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17664..18737)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MUP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71517.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
peptidase M24
L2_022_103G1_scaffold_270_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18828..19937)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5KPR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23574.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L2_022_103G1_scaffold_270_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19934..20293)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5KPR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23574.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_022_103G1_scaffold_270_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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20502..20867
DNA (366bp) protein (122aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KT18_OSCVS
TnpV protein {ECO:0000313|EMBL:KJF38917.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative site-specific recombinase
L2_022_103G1_scaffold_270_18
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20955..21653)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33623.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Recombinase.
L2_022_103G1_scaffold_270_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(21714..22337)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VTJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73114.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L2_022_103G1_scaffold_270_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22445..22600)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJ95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66417.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_022_103G1_scaffold_270_21
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22584..22973)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N027_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76393.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L2_022_103G1_scaffold_270_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23263..23607)
DNA (345bp) protein (115aa)
Transposase n=16 Tax=Clostridiales RepID=E5XKG9_9FIRM
Transposase {ECO:0000313|EMBL:EFV18192.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
integrase catalytic subunit
L2_022_103G1_scaffold_270_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23567..23935)
DNA (369bp) protein (123aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AUZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27212.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
integrase catalytic subunit
L2_022_103G1_scaffold_270_24
Streptococcus sp. GMD4S, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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24165..24716
DNA (552bp) protein (184aa)
PvuIIR n=4 Tax=Streptococcus RepID=K0ZHZ1_9STRE
PvuIIR {ECO:0000313|EMBL:EKA02758.1}; TaxID=1169673 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. GMD4S.;"
type II restriction endonuclease PvuII
L2_022_103G1_scaffold_270_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24751..25692)
DNA (942bp) protein (314aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
DNA methylase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJR6_9FIRM
DNA methyltransferase
L2_022_103G1_scaffold_270_26
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25702..25899)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KTP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46837.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
XRE family transcriptional regulator
L2_022_103G1_scaffold_270_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26748..27608)
DNA (861bp) protein (287aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=3 Tax=Clostridium RepID=D6DH41_CLOSC
L2_022_103G1_scaffold_270_28
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27872..28177)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AKQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ28656.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Helix-turn-helix.
L2_022_103G1_scaffold_270_29
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28401..29066
DNA (666bp) protein (222aa)
Putative domain HDIG n=1 Tax=Clostridium termitidis CT1112 RepID=S0G0B6_9CLOT
Putative domain HDIG {ECO:0000313|EMBL:EMS74248.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L2_022_103G1_scaffold_270_30
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29327..30094)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium COE1 RepID=R9KFD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45180.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transposase
Displaying items 1-30 of 37 in total

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