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L2_022_103G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_272_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..236)
DNA (234bp) protein (78aa)
Putative 2,5-diketo-D-gluconic acid reductase B n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V9R0_BIFBI
Putative 2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:EFR50352.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_103G1_scaffold_272_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

642..1475
DNA (834bp) protein (278aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WI26_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53172.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_272_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1597..2541)
DNA (945bp) protein (315aa)
bacA; bacitracin resistance protein BacA (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Undecaprenyl-diphosphatase n=8 Tax=Bifidobacterium RepID=E3EP66_BIFBS
L2_022_103G1_scaffold_272_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2680..3471
DNA (792bp) protein (264aa)
Fructosamine kinase family protein n=6 Tax=Bifidobacterium RepID=E4NX18_BIFBP
fructosamine-3-kinase
Fructosamine kinase family protein {ECO:0000313|EMBL:CDB23050.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_103G1_scaffold_272_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3607..3912)
DNA (306bp) protein (102aa)
Chaperone protein DnaJ n=9 Tax=Bifidobacterium RepID=E3EQ25_BIFBS
dnaJ; chaperone protein
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_103G1_scaffold_272_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3924..4079
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NC06_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY94996.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_022_103G1_scaffold_272_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4596..5852)
DNA (1257bp) protein (419aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ26_BIFBS
hrcA; Heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_272_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6200..8308
DNA (2109bp) protein (703aa)
Transketolase {ECO:0000313|EMBL:EFR50401.1}; EC=2.2.1.1 {ECO:0000313|EMBL:EFR50401.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Transketolase n=3 Tax=Bifidobacterium bifidum RepID=E3EQ27_BIFBS
tkt; transketolase
L2_022_103G1_scaffold_272_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8440..9543
DNA (1104bp) protein (368aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Transaldolase n=8 Tax=Bifidobacterium bifidum RepID=E3EQ28_BIFBS
tal; transaldolase
L2_022_103G1_scaffold_272_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9786..10598
DNA (813bp) protein (271aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2H8H6_BIFBI
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CDB22295.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_103G1_scaffold_272_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10763..12175
DNA (1413bp) protein (471aa)
Branched-chain amino acid transport system II carrier protein n=3 Tax=Bifidobacterium bifidum RepID=E3EQ30_BIFBS
branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system IIcarrier protein {ECO:0000313|EMBL:AFL04547.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_022_103G1_scaffold_272_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12513..13076)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CD09_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82425.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_272_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13057..14427)
DNA (1371bp) protein (457aa)
Na+ driven multidrug efflux pump n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NX25_BIFBP
Na+ driven multidrug efflux pump
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:EKE50294.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_022_103G1_scaffold_272_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14424..15260)
DNA (837bp) protein (279aa)
putative hydrolase (EC:3.1.3.18)
Putative hydrolase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2INH0_BIFBI
Putative hydrolase {ECO:0000313|EMBL:EKE50295.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_022_103G1_scaffold_272_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15315..16265)
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
ldhL; L-lactate dehydrogenase (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCF9_9BIFI
L2_022_103G1_scaffold_272_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16373..16621)
DNA (249bp) protein (83aa)
Preprotein translocase, SecG subunit n=8 Tax=Bifidobacterium RepID=E3EQ35_BIFBS
secG; protein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ADO53185.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_272_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16700..17494)
DNA (795bp) protein (265aa)
tpiA; triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Triosephosphate isomerase n=6 Tax=Bifidobacterium bifidum RepID=E3EQ36_BIFBS
L2_022_103G1_scaffold_272_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17563..18768)
DNA (1206bp) protein (402aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Phosphoglycerate kinase n=3 Tax=Bifidobacterium bifidum RepID=E3EQ37_BIFBS
L2_022_103G1_scaffold_272_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18926..19897)
DNA (972bp) protein (324aa)
Putative sporulation transcription regulator WhiA n=7 Tax=Bifidobacterium RepID=E3EQ38_BIFBS
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_022_103G1_scaffold_272_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20064..21008)
DNA (945bp) protein (315aa)
UPF0042 nucleotide-binding protein BBB_0965 n=4 Tax=Bifidobacterium bifidum RepID=I3WI44_BIFBI
hypothetical protein
Nucleotide-binding protein BBB_0965 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_022_103G1_scaffold_272_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21008..21970)
DNA (963bp) protein (321aa)
aroE; shikimate 5-dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase substrate binding domain protein n=2 Tax=Bifidobacterium bifidum RepID=E4V9X3_BIFBI
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:BAQ98233.1}; Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:ERI82415.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_022_103G1_scaffold_272_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22164..24506)
DNA (2343bp) protein (781aa)
UvrABC system protein C n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSC4_BIFBI
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
uvrC; excinuclease ABC subunit C
L2_022_103G1_scaffold_272_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24503..27520)
DNA (3018bp) protein (1006aa)
UvrABC system protein A n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEG6_BIFBI
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
uvrA; excinuclease ABC subunit A
L2_022_103G1_scaffold_272_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27740..28381)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DLJ6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI82412.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_022_103G1_scaffold_272_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28435..28839)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ44_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53194.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_272_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29279..29944
DNA (666bp) protein (222aa)
two-component response regulator (EC:2.7.13.3)
Two-component response regulator n=5 Tax=Bifidobacterium bifidum RepID=E4NX38_BIFBP
Two-component response regulator {ECO:0000313|EMBL:EKF15324.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_022_103G1_scaffold_272_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29941..31380
DNA (1440bp) protein (480aa)
sensory transduction protein kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Sensory transduction protein kinase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NX39_BIFBP
L2_022_103G1_scaffold_272_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31409..32158)
DNA (750bp) protein (250aa)
vanYG; M15B family D-Ala-D-Ala carboxypeptidase VanYG (EC:3.4.16.4)
M15B family D-Ala-D-Ala carboxypeptidase VanYG n=2 Tax=Bifidobacterium bifidum RepID=E4NX40_BIFBP
M15B family D-Ala-D-Ala carboxypeptidase VanYG {ECO:0000313|EMBL:EKF15098.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_022_103G1_scaffold_272_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32390..33991
DNA (1602bp) protein (534aa)
ATP-binding protein of ABC transporter system n=7 Tax=Bifidobacterium RepID=E3EQ49_BIFBS
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFL04567.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
ABC transporter ATP-binding protein
L2_022_103G1_scaffold_272_30
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34401..35423)
DNA (1023bp) protein (341aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
GalE UDP-glucose 4-epimerase (Leloir pathway) n=3 Tax=Bifidobacterium RepID=E4NX42_BIFBP
GalE UDP-glucose 4-epimerase (Leloir pathway) {ECO:0000313|EMBL:CDB23233.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Displaying items 1-30 of 35 in total

View Taxonomy