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L2_022_103G1_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_332_1
unknown

Not on your lists

77..712
DNA (636bp) protein (212aa)

This feature has no annotations

L2_022_103G1_scaffold_332_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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763..2028
DNA (1266bp) protein (422aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ATY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54650.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_022_103G1_scaffold_332_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2160..3077
DNA (918bp) protein (306aa)
Oligopeptide transport system permease protein OppB n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBA8_9CLOT
Putative oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:ERI63576.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter permease
L2_022_103G1_scaffold_332_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3088..4407
DNA (1320bp) protein (440aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=G9YRU7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERI63577.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
binding-protein-dependent transport system inner membrane protein
L2_022_103G1_scaffold_332_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4489..5445
DNA (957bp) protein (319aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AVZ5_9CLOT
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:ERI63578.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oligopeptide/dipeptide ABC transporter ATPase
L2_022_103G1_scaffold_332_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5432..6448
DNA (1017bp) protein (339aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=2 Tax=Clostridiales RepID=G9YRU9_9FIRM
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:EHM48118.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
oligopeptide/dipeptide ABC transporter ATPase
L2_022_103G1_scaffold_332_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6445..8190
DNA (1746bp) protein (582aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C845_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ERI63561.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
family 5 extracellular solute-binding protein
L2_022_103G1_scaffold_332_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8344..9018
DNA (675bp) protein (225aa)
Transcriptional regulatory protein CssR n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54656.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator
L2_022_103G1_scaffold_332_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8999..10030
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cssS; sensor histidine kinase CssS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AVX8_9CLOT
L2_022_103G1_scaffold_332_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10048..11091
DNA (1044bp) protein (348aa)
M42 glutamyl aminopeptidase n=2 Tax=Clostridiales RepID=G9YRV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22709.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
endoglucanase
L2_022_103G1_scaffold_332_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11112..12752
DNA (1641bp) protein (547aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ATW8_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:ERI63565.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted metal-dependent hydrolase with the TIM-barrel fold
L2_022_103G1_scaffold_332_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12932..13609)
DNA (678bp) protein (226aa)
Transcriptional regulatory protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLR7_9FIRM
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulator of citrate/malate metabolism
L2_022_103G1_scaffold_332_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13610..15232)
DNA (1623bp) protein (541aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PAS domain S-box protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ACH1_9CLOT
signal transduction histidine kinase regulating citrate/malate metabolism
L2_022_103G1_scaffold_332_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15397..16107
DNA (711bp) protein (237aa)
ATP synthase subunit a n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRV7_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
F0F1 ATP synthase subunit A
L2_022_103G1_scaffold_332_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16135..16353
DNA (219bp) protein (73aa)
ATP synthase F0, C subunit n=3 Tax=Clostridiales RepID=G9YRV8_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATP synthase F0 subunit C
L2_022_103G1_scaffold_332_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16367..16852
DNA (486bp) protein (162aa)
ATP synthase, F0 subunit b (EC:3.6.3.14)
ATP synthase subunit b n=2 Tax=Clostridiales RepID=G9YRV9_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_022_103G1_scaffold_332_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16849..17373
DNA (525bp) protein (175aa)
atpH; ATP synthase F1, subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLR2_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_022_103G1_scaffold_332_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17370..18890
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATP synthase subunit alpha n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLR1_9FIRM
ATP synthase F1 subunit alpha
L2_022_103G1_scaffold_332_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18878..19759
DNA (882bp) protein (294aa)
atpG; ATP synthase F1, gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRW2_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_022_103G1_scaffold_332_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19819..21219
DNA (1401bp) protein (467aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATP synthase subunit beta n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRW3_9FIRM
AtpD; F0F1-type ATP synthase subunit beta
L2_022_103G1_scaffold_332_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21220..21627
DNA (408bp) protein (136aa)
atpC; ATP synthase F1, epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=2 Tax=Clostridiales RepID=G9YRW4_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_022_103G1_scaffold_332_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21794..22750)
DNA (957bp) protein (319aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRW5_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EHM48134.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_022_103G1_scaffold_332_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23007..24608
DNA (1602bp) protein (534aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22696.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
extracellular solute-binding protein
L2_022_103G1_scaffold_332_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24636..25604
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22695.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter permease
L2_022_103G1_scaffold_332_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25601..26422
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=G9YS40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22694.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_022_103G1_scaffold_332_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26407..28044
DNA (1638bp) protein (546aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C7T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54675.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_022_103G1_scaffold_332_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28072..28605
DNA (534bp) protein (178aa)
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE n=2 Tax=Clostridiales RepID=G9YS42_9FIRM
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE {ECO:0000313|EMBL:ERI63447.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_022_103G1_scaffold_332_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28616..29359
DNA (744bp) protein (248aa)
TIGR00268 family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS43_9FIRM
TIGR00268 family protein {ECO:0000313|EMBL:EHM46647.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_022_103G1_scaffold_332_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29360..30121
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C2D7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI63437.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
L2_022_103G1_scaffold_332_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30118..31395
DNA (1278bp) protein (426aa)
UPF0272 protein HMPREF0372_02351 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YS45_9FIRM
UPF0272 protein HMPREF9460_02642 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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