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L2_022_103G1_scaffold_368

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_368_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1218)
DNA (1218bp) protein (406aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Glutamine synthetase n=5 Tax=Bifidobacterium longum RepID=B3DT05_BIFLD
glutamine synthase
L2_022_103G1_scaffold_368_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1538..2320)
DNA (783bp) protein (261aa)
Narrowly conserved hypothetical transmembrane protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ7_BIFLS
hypothetical protein
Narrowly conserved hypothetical transmembrane protein {ECO:0000313|EMBL:ACJ52966.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_368_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2404..3894)
DNA (1491bp) protein (497aa)
Dihydrolipoamide dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ6_BIFLS
dihydrolipoamide dehydrogenase
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:ACJ52965.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_368_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4043..4558)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ5_BIFLS
Membrane protein {ECO:0000313|EMBL:KEY29389.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_022_103G1_scaffold_368_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4758..6125
DNA (1368bp) protein (456aa)
Peptidase M20 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ4_BIFLS
hypothetical protein
Peptidase {ECO:0000313|EMBL:KEY29388.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_022_103G1_scaffold_368_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6426..7025
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ3_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52962.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_368_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7025..8503
DNA (1479bp) protein (493aa)
ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ2_BIFLS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACJ52961.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_368_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8496..9323
DNA (828bp) protein (276aa)
ABC-type cobalt transport system permease component n=8 Tax=Bifidobacterium RepID=B3DSZ8_BIFLD
cobalt ABC transporter permease
Cobalt ABC transporter permease {ECO:0000313|EMBL:KEY32567.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_022_103G1_scaffold_368_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9424..10302
DNA (879bp) protein (293aa)
Putative rRNA methylase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTQ0_BIFLS
rRNA methyltransferase {ECO:0000313|EMBL:KEY29384.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
tRNA/rRNA methyltransferase SpoU
L2_022_103G1_scaffold_368_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10368..11423
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Phenylalanine--tRNA ligase alpha subunit n=15 Tax=Bifidobacterium RepID=SYFA_BIFLO
pheS; phes
L2_022_103G1_scaffold_368_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11431..14040
DNA (2610bp) protein (870aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA3_BIFLJ
phenylalanyl-tRNA synthetase subunit beta
L2_022_103G1_scaffold_368_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14071..14757
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA4_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI69701.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_022_103G1_scaffold_368_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14856..15950
DNA (1095bp) protein (365aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E7V5_BIFLI
N-acetyl-gamma-glutamyl-phosphate reductase
L2_022_103G1_scaffold_368_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15947..17122
DNA (1176bp) protein (392aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GTP5_BIFLS
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_368_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17223..18215
DNA (993bp) protein (331aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Acetylglutamate kinase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTA7_BIFLJ
acetylglutamate kinase
L2_022_103G1_scaffold_368_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18205..19500
DNA (1296bp) protein (432aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Acetylornithine aminotransferase n=5 Tax=Bifidobacterium longum RepID=V6XV49_BIFLN
acetylornithine aminotransferase
L2_022_103G1_scaffold_368_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19544..20509
DNA (966bp) protein (322aa)
Ornithine carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000255|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000255|HAMAP-Rule:MF_01109};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Ornithine carbamoyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=OTC_BIFLS
ornithine carbamoyltransferase
L2_022_103G1_scaffold_368_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20506..21018
DNA (513bp) protein (171aa)
Arginine repressor n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZTB0_BIFLJ
arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_022_103G1_scaffold_368_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21101..22339
DNA (1239bp) protein (413aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Argininosuccinate synthase n=6 Tax=Bifidobacterium longum RepID=D6ZTB1_BIFLJ
argininosuccinate synthase
L2_022_103G1_scaffold_368_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22515..23987
DNA (1473bp) protein (491aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Argininosuccinate lyase n=15 Tax=Bifidobacterium RepID=ARLY_BIFLD
argininosuccinate lyase
L2_022_103G1_scaffold_368_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24336..24530
DNA (195bp) protein (65aa)
Sulfur transfer protein for thiamine biosynthesis n=20 Tax=Bifidobacterium RepID=B3DSY5_BIFLD
hypothetical protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ACJ52947.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_368_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24542..25411
DNA (870bp) protein (290aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Thiazole synthase n=18 Tax=Bifidobacterium RepID=B3DSY4_BIFLD
thiazole synthase
L2_022_103G1_scaffold_368_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25488..26297
DNA (810bp) protein (270aa)
Thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTB5_BIFLJ
Adenylyltransferase {ECO:0000313|EMBL:KEY29370.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
thiazole biosynthesis adenylyltransferase ThiF
L2_022_103G1_scaffold_368_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26354..26710
DNA (357bp) protein (119aa)
Rhodanese domain protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTB6_BIFLJ
Sulfurtransferase {ECO:0000313|EMBL:KEY29369.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
rhodanese domain-containing protein
L2_022_103G1_scaffold_368_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26868..27401
DNA (534bp) protein (178aa)
HD domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATJ3_BIFLN
phosphohydrolase
HD domain protein {ECO:0000313|EMBL:EIJ32182.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_022_103G1_scaffold_368_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27398..28165
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MLT6_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEF12277.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_368_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28291..29202
DNA (912bp) protein (304aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Tyrosine--tRNA ligase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=SYY_BIFLO
tyrosyl-tRNA synthase
Displaying 27 items

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