ggKbase home page

L2_022_103G1_scaffold_387

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_387_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..892
DNA (891bp) protein (297aa)
AP endonuclease, family 2 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AN33_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI67229.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
xylose isomerase
L2_022_103G1_scaffold_387_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

889..1863
DNA (975bp) protein (325aa)
Putative glycerate dehydrogenase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4U2_9CLOT
Putative glycerate dehydrogenase {ECO:0000313|EMBL:ERI67230.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L2_022_103G1_scaffold_387_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1945..2829
DNA (885bp) protein (295aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIU4_9CLOT
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ERI67231.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_103G1_scaffold_387_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2874..4094
DNA (1221bp) protein (407aa)
MOFRL family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CDB8_9CLOT
MOFRL family protein {ECO:0000313|EMBL:ERI67232.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
D-isomer specific 2-hydroxyacid dehydrogenase
L2_022_103G1_scaffold_387_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4878..6041
DNA (1164bp) protein (388aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CDZ0_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI65601.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
integrase family protein
L2_022_103G1_scaffold_387_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6276..6689
DNA (414bp) protein (138aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIR8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI69137.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
helix-turn-helix domain-containing protein
L2_022_103G1_scaffold_387_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6712..7443
DNA (732bp) protein (244aa)
PHP domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CP90_9CLOT
PHP domain protein {ECO:0000313|EMBL:ERI69136.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
protein-tyrosine phosphatase
L2_022_103G1_scaffold_387_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7519..8256
DNA (738bp) protein (246aa)
Chain length determinant protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAB6_9CLOT
Chain length determinant protein {ECO:0000313|EMBL:ERI69135.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
polysaccharide export protein
L2_022_103G1_scaffold_387_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8352..9314
DNA (963bp) protein (321aa)
Capsular exopolysaccharide family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K9V1_9FIRM
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EGN40617.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
polysaccharide biosynthesis protein
L2_022_103G1_scaffold_387_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9331..10086
DNA (756bp) protein (252aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B3S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66423.1}; Flags: Fragment;; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_103G1_scaffold_387_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10102..10800
DNA (699bp) protein (233aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QGF5_9FIRM
Thymidylate kinase {ECO:0000313|EMBL:CDC29961.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_022_103G1_scaffold_387_12
Streptococcus pseudoporcinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10823..11197
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Streptococcus parauberis KRS-02109 RepID=M5PJF5_9STRE
WxcM-like protein {ECO:0000313|EMBL:EHI65522.1}; TaxID=875093 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pseudoporcinus LQ 940-04.;"
WxcM domain-containing protein
L2_022_103G1_scaffold_387_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11194..11622
DNA (429bp) protein (143aa)
WxcM domain protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C988_9CLOT
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AGF59162.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_022_103G1_scaffold_387_14
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11624..12745
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KAW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43391.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
eryC; Erythromycin biosynthesis sensory transduction protein eryC1
L2_022_103G1_scaffold_387_15
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12738..13847
DNA (1110bp) protein (370aa)
Acyltransferase n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GCD3_9FIRM
Acyltransferase {ECO:0000313|EMBL:EJP18920.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L2_022_103G1_scaffold_387_16
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14149..14961
DNA (813bp) protein (271aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EGV11052.1}; EC=2.4.1.- {ECO:0000313|EMBL:EGV11052.1};; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393 str. F0440.;"
Bacterial sugar transferase n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PPC1_9FIRM
glycosyl transferase family protein
L2_022_103G1_scaffold_387_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14982..15947
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LI03_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45317.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_022_103G1_scaffold_387_18
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15972..17273
DNA (1302bp) protein (434aa)
Biotin carboxylase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FCJ9_9FIRM
Biotin carboxylase {ECO:0000313|EMBL:CDE12580.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
biotin carboxylase
L2_022_103G1_scaffold_387_19
unknown

Not on your lists

17286..18203
DNA (918bp) protein (306aa)

This feature has no annotations

L2_022_103G1_scaffold_387_20
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18264..19469
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YBE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61903.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_022_103G1_scaffold_387_21
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19522..20706
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YBE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD61903.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_022_103G1_scaffold_387_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20755..21978
DNA (1224bp) protein (408aa)
Bacterial capsule synthesis protein n=2 Tax=Parabacteroides RepID=C7X9Q8_9PORP
Bacterial capsule synthesis PGA_cap family protein {ECO:0000313|EMBL:KDS63234.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
capsule biosynthesis protein
L2_022_103G1_scaffold_387_23
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22009..23202
DNA (1194bp) protein (398aa)
Putative glycosyltransferase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QU40_9FIRM
Putative glycosyltransferase {ECO:0000313|EMBL:CDC36489.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
glycosyl transferase family protein
L2_022_103G1_scaffold_387_24
unknown

Not on your lists

23351..24550
DNA (1200bp) protein (400aa)

This feature has no annotations

L2_022_103G1_scaffold_387_25
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24585..26018
DNA (1434bp) protein (478aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW24_9CLOT
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:EKQ56965.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_022_103G1_scaffold_387_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26011..27519
DNA (1509bp) protein (503aa)
nucleotidyltransferase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B4C0A2
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
rfaE bifunctional protein
L2_022_103G1_scaffold_387_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27674..27769)
DNA (96bp) protein (32aa)
Site-specific recombinase, phage integrase family (Fragment) n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RAF5_9FIRM
int; Integrase Tn916-like, CTn1-Orf1
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK42958.1}; Flags: Fragment;; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Displaying 27 items

View Taxonomy