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L2_022_103G1_scaffold_392

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_392_1
unknown

Not on your lists

comp(272..364)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_022_103G1_scaffold_392_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(397..1188)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DYQ9_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86837.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_022_103G1_scaffold_392_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1430..2824
DNA (1395bp) protein (465aa)
Guanine-hypoxanthine permease n=4 Tax=Bifidobacterium breve RepID=F9XYG1_BIFBU
Guanine-hypoxanthine permease
Guanine-hypoxanthine permease {ECO:0000313|EMBL:ABE96344.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_103G1_scaffold_392_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3456..4235)
DNA (780bp) protein (260aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphate ABC transporter, ATP-binding protein n=3 Tax=Bifidobacterium breve RepID=F6C7P0_BIFBA
Phosphate transport ATP-binding protein pstB
L2_022_103G1_scaffold_392_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4281..5279)
DNA (999bp) protein (333aa)
Phosphate transport system permease protein pstA n=4 Tax=Bifidobacterium breve RepID=F9XYG3_BIFBU
Phosphate transport system permease protein pstA
Phosphate transport system permease protein pstA {ECO:0000313|EMBL:AHJ21872.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_103G1_scaffold_392_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5279..6232)
DNA (954bp) protein (318aa)
Phosphate ABC transporter, permease protein PstC n=6 Tax=Bifidobacterium breve RepID=F6C7P2_BIFBA
Phosphate transport system permease protein pstC
Phosphate transport system permease protein pstC {ECO:0000313|EMBL:ABE96347.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_103G1_scaffold_392_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6439..7569)
DNA (1131bp) protein (377aa)
Phosphate-binding protein PstS n=4 Tax=Bifidobacterium breve RepID=F9XYN9_BIFBU
Phosphate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_022_103G1_scaffold_392_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7823..8593)
DNA (771bp) protein (257aa)
Two-component response regulator PhoP n=4 Tax=Bifidobacterium breve RepID=F9XYP0_BIFBU
Two-component response regulator PhoP
Two-component response regulator PhoP {ECO:0000313|EMBL:AHJ20025.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_022_103G1_scaffold_392_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8646..9983)
DNA (1338bp) protein (446aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQK0_BIFBR
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFE88495.1}; Two-component sensor kinase {ECO:0000313|EMBL:BAR00733.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phosphate regulon sensor protein PhoR
L2_022_103G1_scaffold_392_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10079..11386)
DNA (1308bp) protein (436aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium breve RepID=F6C7P6_BIFBA
Transporter, MFS superfamily
Uncharacterized protein {ECO:0000313|EMBL:EPD76026.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_103G1_scaffold_392_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11654..12367)
DNA (714bp) protein (238aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase n=3 Tax=Bifidobacterium breve RepID=F9XYP3_BIFBU
5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
L2_022_103G1_scaffold_392_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12508..13740)
DNA (1233bp) protein (411aa)
3-deoxy-7-phosphoheptulonate synthase n=3 Tax=Bifidobacterium breve RepID=F6C7P8_BIFBA
3-deoxy-7-phosphoheptulonate synthase
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EPD76028.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_103G1_scaffold_392_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13805..14941)
DNA (1137bp) protein (379aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AI47_BIFBR
3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive
L2_022_103G1_scaffold_392_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15161..16507)
DNA (1347bp) protein (449aa)
Peptidase C1-like family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQJ5_BIFBR
Aminopeptidase C
Peptidase C1-like family protein {ECO:0000313|EMBL:ERI86825.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_022_103G1_scaffold_392_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16625..18064)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7Y9_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27264.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_103G1_scaffold_392_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18203..18880)
DNA (678bp) protein (226aa)
Pyroglutamyl-peptidase I n=3 Tax=Bifidobacterium breve RepID=S2ZGZ5_BIFBR
Pyrrolidone-carboxylate peptidase
Pyroglutamyl-peptidase I {ECO:0000313|EMBL:EPD76043.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_103G1_scaffold_392_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18919..19764)
DNA (846bp) protein (282aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Bifidobacterium breve RepID=D4BQJ2_BIFBR
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L2_022_103G1_scaffold_392_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19835..20899)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZD0_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21896.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_103G1_scaffold_392_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21214..22752)
DNA (1539bp) protein (513aa)
Peptidase, U32 family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZC9_BIFBR
Peptidase family U32
Peptidase family U32 {ECO:0000313|EMBL:ABE96371.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_103G1_scaffold_392_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22826..23776
DNA (951bp) protein (317aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZC8_BIFBR
tRNA (Guanine-N1) -methyltransferase
L2_022_103G1_scaffold_392_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23778..24359)
DNA (582bp) protein (194aa)
RNA methyltransferase, RsmD family n=2 Tax=Bifidobacterium breve RepID=F6C7Z5_BIFBA
Methyltransferase
Methyltransferase {ECO:0000313|EMBL:AHJ21899.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_103G1_scaffold_392_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24695..27301)
DNA (2607bp) protein (869aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AI67_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76049.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
recG; ATP-dependent DNA helicase recG
L2_022_103G1_scaffold_392_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27400..27588)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=6 Tax=Bifidobacterium breve RepID=F6C7Z7_BIFBA
LSU ribosomal protein L28P
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 23 items

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