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L2_022_103G1_scaffold_400

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_400_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1169)
DNA (1167bp) protein (389aa)
PTS system transcriptional activator n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDC9_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EHI99227.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PTS system transcriptional activator
L2_022_103G1_scaffold_400_2
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1176..2303)
DNA (1128bp) protein (376aa)
Anaerobic sulfatase-maturating enzyme {ECO:0000313|EMBL:CDI40804.1}; EC=1.8.98.- {ECO:0000313|EMBL:CDI40804.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
Anaerobic sulfatase-maturating enzyme n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWQ1_TEPAE
radical SAM protein
L2_022_103G1_scaffold_400_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2320..3099)
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CWM0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16771.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_022_103G1_scaffold_400_4
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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3374..3805
DNA (432bp) protein (144aa)
PTS system fructose subfamily IIA component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK34_SEBTE
PTS system fructose subfamily transporter subunit IIA
PTS system fructose subfamily IIA component {ECO:0000313|EMBL:ACZ08950.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_022_103G1_scaffold_400_5
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

3828..4298
DNA (471bp) protein (157aa)
PTS system sorbose subfamily IIB component n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK35_SEBTE
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:ACZ08951.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_022_103G1_scaffold_400_6
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

4333..5136
DNA (804bp) protein (268aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AK36_SEBTE
PTS sorbose-specific transporter subunit IIC
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:ACZ08952.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L2_022_103G1_scaffold_400_7
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5136..5948
DNA (813bp) protein (271aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2NTS0_9ENTE
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EOH74408.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_022_103G1_scaffold_400_8
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6080..7558
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002D6E81D
Uncharacterized protein {ECO:0000313|EMBL:EOH74407.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 43197.;"
sulfatase
L2_022_103G1_scaffold_400_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7574..8002
DNA (429bp) protein (143aa)
lacA; isomerase/acetyltransferase (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=2 Tax=Clostridium butyricum RepID=B1R026_CLOBU
Galactose-6-phosphate isomerase {ECO:0000313|EMBL:KJU72899.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_022_103G1_scaffold_400_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8015..8530
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit lacB (EC:5.3.1.26)
Galactose-6-phosphate isomerase subunit lacB {ECO:0000313|EMBL:AIY84639.1}; EC=5.3.1.26 {ECO:0000313|EMBL:AIY84639.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Galactose-6-phosphate isomerase subunit lacB n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QHC3_9BACI
L2_022_103G1_scaffold_400_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8548..9402
DNA (855bp) protein (285aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.-)
fructose-bisphosphate aldolase n=1 Tax=Clostridium botulinum RepID=UPI0002D5B856
Class II aldolase, tagatose bisphosphate family {ECO:0000313|EMBL:AIY79875.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_022_103G1_scaffold_400_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9421..10350
DNA (930bp) protein (310aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
pfkB; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase LacC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZG5_CLOSA
L2_022_103G1_scaffold_400_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10530..14201
DNA (3672bp) protein (1224aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82372.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
alpha-L-arabinofuranosidase
L2_022_103G1_scaffold_400_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14449..14859)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQX4_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49924.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L2_022_103G1_scaffold_400_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15219..15707)
DNA (489bp) protein (163aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QU58_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33375.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_022_103G1_scaffold_400_16
unknown

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comp(15885..16199)
DNA (315bp) protein (105aa)

This feature has no annotations

L2_022_103G1_scaffold_400_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16477..17496
DNA (1020bp) protein (340aa)
pyk1; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Pyruvate kinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LY09_9CLOT
L2_022_103G1_scaffold_400_18
unknown

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17499..17603
DNA (105bp) protein (35aa)

This feature has no annotations

L2_022_103G1_scaffold_400_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17745..19715
DNA (1971bp) protein (657aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWW2_CLOBA
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:KIE48266.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
methyl-accepting chemotaxis protein
L2_022_103G1_scaffold_400_20
unknown

Not on your lists

19800..20597
DNA (798bp) protein (266aa)

This feature has no annotations

L2_022_103G1_scaffold_400_21
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20752..22098
DNA (1347bp) protein (449aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01048.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L2_022_103G1_scaffold_400_22
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22208..22990
DNA (783bp) protein (261aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQW7_CLOPA
Transcriptional regulator {ECO:0000313|EMBL:ETD66535.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
RpiR family transcriptional regulator
L2_022_103G1_scaffold_400_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23088..23243
DNA (156bp) protein (52aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QUM3_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP56407.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_022_103G1_scaffold_400_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23405..24244
DNA (840bp) protein (280aa)
DegV family EDD domain-containing protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G8_9CLOT
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EEH98626.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_022_103G1_scaffold_400_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24270..24809
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20082.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L2_022_103G1_scaffold_400_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24833..25270
DNA (438bp) protein (146aa)
GNAT family acetyltransferase n=2 Tax=Clostridium botulinum RepID=M2A041_CLOBO
GNAT family acetyltransferase {ECO:0000313|EMBL:EKN43435.1}; TaxID=1232189 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CFSAN001627.;"
hypothetical protein
L2_022_103G1_scaffold_400_27
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25318..26550)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI000317DCCC
Uncharacterized protein {ECO:0000313|EMBL:EHO84220.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
major facilitator transporter
L2_022_103G1_scaffold_400_28
unknown

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comp(26677..26859)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 28 items

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