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L2_022_103G1_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_401_1
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE01_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFJ01027.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
transposase IS1557
L2_022_103G1_scaffold_401_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(506..3025)
DNA (2520bp) protein (840aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL44_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KEY26974.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
metallophosphoesterase
L2_022_103G1_scaffold_401_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3186..4124)
DNA (939bp) protein (313aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Protease HtpX homolog n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT23_BIFLS
heat shock protein HtpX
L2_022_103G1_scaffold_401_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4262..5899)
DNA (1638bp) protein (546aa)
NADPH-ferredoxin reductase FprA {ECO:0000313|EMBL:CEF03239.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CEF03239.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Putative ferredoxin/ferredoxin-NADP reductase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMX4_BIFLS
putative ferredoxin/ferredoxin-NADP reductase
L2_022_103G1_scaffold_401_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5931..6785)
DNA (855bp) protein (285aa)
Urease accessory protein UreD n=1 Tax=Bifidobacterium longum subsp. infantis RepID=D5LKC8_BIFLI
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Urease accessory protein UreD
L2_022_103G1_scaffold_401_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6841..7452)
DNA (612bp) protein (204aa)
Urease accessory protein UreG n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT20_BIFLS
urease accessory protein UreG
Urease accessory protein UreG {ECO:0000313|EMBL:ACJ51243.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7496..8317)
DNA (822bp) protein (274aa)
Urease accessory protein UreF n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT19_BIFLS
urease accessory protein UreF
Urease accessory protein UreF {ECO:0000313|EMBL:ACJ51242.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8347..8985)
DNA (639bp) protein (213aa)
Urease accessory protein UreE n=2 Tax=Bifidobacterium longum RepID=UREE_BIFLS
urease accessory protein UreE
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_401_9
unknown

Not on your lists

comp(9037..9132)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_022_103G1_scaffold_401_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9161..10882)
DNA (1722bp) protein (574aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Urease subunit alpha n=1 Tax=Bifidobacterium longum subsp. infantis RepID=D5LKC4_BIFLI
urease alpha subunit
L2_022_103G1_scaffold_401_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10885..11583)
DNA (699bp) protein (233aa)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
bifunctional urease subunit gamma/beta (EC:3.5.1.5)
Urease gamma subunit n=1 Tax=Bifidobacterium longum subsp. infantis RepID=D5LKC3_BIFLI
L2_022_103G1_scaffold_401_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11692..12711)
DNA (1020bp) protein (340aa)
Nickel transport protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMW7_BIFLS
nickel transport protein
Nickel permease {ECO:0000313|EMBL:KEY26983.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_022_103G1_scaffold_401_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12918..13625)
DNA (708bp) protein (236aa)
ABC transporter ATP-binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT14_BIFLS
ABC transporter ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACJ51237.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13625..14542)
DNA (918bp) protein (306aa)
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMW5_BIFLS
ABC transporter ATP-binding protein
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:CEF07149.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_401_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14539..15654)
DNA (1116bp) protein (372aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ7_BIFLS
ABC transporter permease
Inner-membrane translocator {ECO:0000313|EMBL:ACJ51235.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15676..16560)
DNA (885bp) protein (295aa)
ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ6_BIFLS
ABC transporter permease
Inner-membrane translocator {ECO:0000313|EMBL:ACJ51234.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16733..17995)
DNA (1263bp) protein (421aa)
ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMW2_BIFLS
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY26988.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
ABC transporter substrate binding component
L2_022_103G1_scaffold_401_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18385..20547)
DNA (2163bp) protein (721aa)
Heavy metal translocating P-type ATPase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ4_BIFLS
putative cation-transporting ATPase V
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACJ51232.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20945..23005)
DNA (2061bp) protein (687aa)
Peptidase S1 and S6, chymotrypsin/Hap n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ3_BIFLS
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ACJ51231.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
peptidase S1 and S6, chymotrypsin/Hap
L2_022_103G1_scaffold_401_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23421..24734
DNA (1314bp) protein (438aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Queuine tRNA-ribosyltransferase n=6 Tax=Bifidobacterium RepID=B3DNU0_BIFLD
tgt; Queuine/archaeosine tRNA-ribosyltransferase
L2_022_103G1_scaffold_401_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25118..25372
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMV5_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY26993.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_022_103G1_scaffold_401_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25485..25724
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ1_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51229.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25711..26073
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSQ0_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KEY26995.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L2_022_103G1_scaffold_401_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26360..26941)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QB12_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40263.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L2_022_103G1_scaffold_401_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26904..27224)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSP9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51227.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_022_103G1_scaffold_401_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27211..28656)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QB10_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40261.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L2_022_103G1_scaffold_401_27
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28653..29363)
DNA (711bp) protein (237aa)
ABC transporter ATP-binding protein (EC:3.6.3.41)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0QB09_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO97537.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L2_022_103G1_scaffold_401_28
Bifidobacterium bohemicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30429..31598)
DNA (1170bp) protein (390aa)
Two-component system sensor kinase {ECO:0000313|EMBL:KFI46939.1}; TaxID=1437606 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bohemicum DSM 22767.;"
L2_022_103G1_scaffold_401_29
Bifidobacterium bohemicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31595..32275)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTM1_BIFLS
Two-component system response regulator {ECO:0000313|EMBL:KFI46940.1}; TaxID=1437606 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bohemicum DSM 22767.;"
two component transcriptional regulator, LuxR family
L2_022_103G1_scaffold_401_30
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33064..34212)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini (strain RyC-MR95) RepID=G4Q4T8_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ23193.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Displaying items 1-30 of 48 in total

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