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L2_022_103G1_scaffold_488

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_488_1
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..548)
DNA (546bp) protein (182aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components {ECO:0000313|EMBL:CBK79871.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBK79871.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components n=1 Tax=Coprococcus catus GD/7 RepID=D4J6A0_9FIRM
L2_022_103G1_scaffold_488_2
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(554..1570)
DNA (1017bp) protein (339aa)
Iron complex ABC transporter permease n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5H2_9CLOT
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CDA64972.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
ABC-type Fe3+-siderophore transport system, permease component
L2_022_103G1_scaffold_488_3
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(1578..2744)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9XGB9_9CLOT
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:CDA64971.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L2_022_103G1_scaffold_488_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2741..3277)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LSH3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23731.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_022_103G1_scaffold_488_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3343..3852)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VW74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB85600.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_022_103G1_scaffold_488_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3865..5073)
DNA (1209bp) protein (403aa)
Cobalamin biosynthesis protein CbiK, Co2+ chelatase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M008_9FIRM
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
Cobalamin biosynthesis protein CbiK, Co2+ chelatase {ECO:0000313|EMBL:CBL27368.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_022_103G1_scaffold_488_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(5536..6405)
DNA (870bp) protein (290aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUP5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY40502.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_022_103G1_scaffold_488_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6580..7500)
DNA (921bp) protein (307aa)
Elongation factor Ts n=2 Tax=Clostridiales RepID=B0NHL2_CLOSV
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
translation elongation factor Ts (EF-Ts)
L2_022_103G1_scaffold_488_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7535..8290)
DNA (756bp) protein (252aa)
30S ribosomal protein S2 n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBT9_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
rpsB; 30S ribosomal protein S2
L2_022_103G1_scaffold_488_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8550..9785)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NFM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS82130.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_022_103G1_scaffold_488_11
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9890..10786)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74796.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Predicted metal-dependent membrane protease
L2_022_103G1_scaffold_488_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10776..11942)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74033.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
L2_022_103G1_scaffold_488_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11949..13715)
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJT2_9CLOT
L2_022_103G1_scaffold_488_14
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13869..14768
DNA (900bp) protein (300aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
apurinic endonuclease (APN1) (EC:3.1.21.2)
Probable endonuclease 4 n=3 Tax=Lachnospiraceae RepID=E9RVK3_9FIRM
L2_022_103G1_scaffold_488_15
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15041..15613
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZE9_9CLOT
L2_022_103G1_scaffold_488_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15660..16721)
DNA (1062bp) protein (354aa)
Putative xanthine dehydrogenase accessory factor n=2 Tax=Dorea RepID=A6BKT1_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EDM61702.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L2_022_103G1_scaffold_488_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16678..17451)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RV06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75003.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_022_103G1_scaffold_488_18
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17406..18776)
DNA (1371bp) protein (457aa)
Selenium-dependent molybdenum hydroxylase system protein YqeB family n=1 Tax=Roseburia sp. CAG:471 RepID=R7E9H8_9FIRM
Selenium-dependent molybdenum hydroxylase system protein YqeB family {ECO:0000313|EMBL:CDD98953.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L2_022_103G1_scaffold_488_19
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18773..21052)
DNA (2280bp) protein (760aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y344_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58943.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_022_103G1_scaffold_488_20
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21057..21524)
DNA (468bp) protein (156aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z4B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58944.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L2_022_103G1_scaffold_488_21
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21525..22103)
DNA (579bp) protein (193aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R580_CLOSW
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein {ECO:0000313|EMBL:EXG83510.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
molybdopterin dehydrogenase FAD-binding protein
Displaying 21 items

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