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L2_022_103G1_scaffold_510

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_510_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..108)
DNA (108bp) protein (36aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Hydroxyethylthiazole kinase, sugar kinase family (EC:2.7.1.50)
Kinase (Fragment) n=1 Tax=human gut metagenome RepID=K1U6B7_9ZZZZ
L2_022_103G1_scaffold_510_2
unknown

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168..620
DNA (453bp) protein (151aa)

This feature has no annotations

L2_022_103G1_scaffold_510_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(472..2208)
DNA (1737bp) protein (579aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YU53_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94423.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L2_022_103G1_scaffold_510_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2201..3979)
DNA (1779bp) protein (593aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FUW3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA80176.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_103G1_scaffold_510_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4135..4683
DNA (549bp) protein (183aa)
Putative YbaK/prolyl-tRNA synthetase domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YU37_9CLOT
Putative YbaK/prolyl-tRNA synthetase domain protein {ECO:0000313|EMBL:EGB94407.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L2_022_103G1_scaffold_510_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4718..5899
DNA (1182bp) protein (394aa)
Ser/Thr phosphatase family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJE1_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EET59255.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Predicted phosphohydrolases
L2_022_103G1_scaffold_510_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6033..7151)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68221.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_103G1_scaffold_510_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7148..8023)
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHG1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFC98738.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC transporter ATP-binding protein
L2_022_103G1_scaffold_510_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8036..8809)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TY03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68219.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_022_103G1_scaffold_510_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8797..9336)
DNA (540bp) protein (180aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W5G5_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY98119.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_022_103G1_scaffold_510_11
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9473..10138)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KF94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42147.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
GntR family transcriptional regulator
L2_022_103G1_scaffold_510_12
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10160..11269)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SNA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFP61021.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
hypothetical protein
L2_022_103G1_scaffold_510_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11274..11723)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WUA4_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY87056.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Hypothetical protein
L2_022_103G1_scaffold_510_14
unknown

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comp(11741..11932)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_022_103G1_scaffold_510_15
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11949..12263)
DNA (315bp) protein (105aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F6N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46000.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
L2_022_103G1_scaffold_510_16
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12344..13738)
DNA (1395bp) protein (465aa)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Firmicutes RepID=H1BI72_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
PTS system, lactose/cellobiose family IIC subunit
L2_022_103G1_scaffold_510_17
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13772..14074)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U5F689_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46002.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
phosphotransferase system lactose/cellobiose-specific IIB subunit
L2_022_103G1_scaffold_510_18
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14406..15731
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BI70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO86882.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
glycoside hydrolase, family 4
L2_022_103G1_scaffold_510_19
unknown

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comp(15744..16016)
DNA (273bp) protein (91aa)

This feature has no annotations

L2_022_103G1_scaffold_510_20
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16205..16885)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IHP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS21311.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Site-specific recombinase XerD
L2_022_103G1_scaffold_510_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17152..18354)
DNA (1203bp) protein (401aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G7E9_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDB17429.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L2_022_103G1_scaffold_510_22
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18451..19899)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00035E3F0E
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDM69225.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_022_103G1_scaffold_510_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20076..20969)
DNA (894bp) protein (298aa)
Putative glycosyltransferase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L953_PARD8
glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EEU50988.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Displaying 23 items

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