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L2_022_103G1_scaffold_512

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_512_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..867)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57724.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L2_022_103G1_scaffold_512_2
unknown

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comp(818..973)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_022_103G1_scaffold_512_3
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1110..2729
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YGV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63476.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
glucan 1,6-alpha-glucosidase
L2_022_103G1_scaffold_512_4
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2731..3438
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D665_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75648.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L2_022_103G1_scaffold_512_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3543..4061
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ruminococcus lactaris RepID=B5CLH8_9FIRM
L2_022_103G1_scaffold_512_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4191..5966
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23055.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cobalt transport protein ATP-binding subunit
L2_022_103G1_scaffold_512_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5963..6787
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=3 Tax=Clostridiales RepID=F7JTZ9_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L2_022_103G1_scaffold_512_8
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6910..7857
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JPG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36119.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
helix-turn-helix type 11 domain-containing protein
L2_022_103G1_scaffold_512_9
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7847..8035
DNA (189bp) protein (63aa)
Hypothetical Cytosolic Protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7J4_9CLOT
Hypothetical Cytosolic Protein {ECO:0000313|EMBL:CCX37022.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L2_022_103G1_scaffold_512_10
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8051..8689
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B3T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ31319.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_022_103G1_scaffold_512_11
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8766..9911)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BZ54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59499.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L2_022_103G1_scaffold_512_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10044..10859
DNA (816bp) protein (272aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. D5 RepID=F0Z4Z9_9CLOT
L2_022_103G1_scaffold_512_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10840..12000
DNA (1161bp) protein (387aa)
Cysteine desulfurase n=1 Tax=Dorea sp. CAG:317 RepID=R6WLQ2_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:CDD07874.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
cysteine desulfurase
L2_022_103G1_scaffold_512_14
unknown

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12018..12233
DNA (216bp) protein (72aa)

This feature has no annotations

L2_022_103G1_scaffold_512_15
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12178..13452
DNA (1275bp) protein (425aa)
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Dorea sp. CAG:317 RepID=R6WEM4_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component {ECO:0000313|EMBL:CDD07875.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L2_022_103G1_scaffold_512_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13470..13724
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WV03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07876.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_022_103G1_scaffold_512_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13817..14599
DNA (783bp) protein (261aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=E9RXF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74112.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
(R)-hydroxyglutaryl-CoA dehydratase activator
L2_022_103G1_scaffold_512_18
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14668..15102
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036CC41F
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDE46773.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
transcriptional regulator, BadM/Rrf2 family
L2_022_103G1_scaffold_512_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15267..16253
DNA (987bp) protein (329aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=2 Tax=Coprococcus RepID=R6LR41_9FIRM
L2_022_103G1_scaffold_512_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16363..17694
DNA (1332bp) protein (444aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4S3_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EGN43404.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_022_103G1_scaffold_512_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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18070..19245
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MGW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70250.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Site-specific recombinase XerD
L2_022_103G1_scaffold_512_22
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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19782..20216
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003790132
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04426.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_022_103G1_scaffold_512_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20372..20866
DNA (495bp) protein (165aa)
Transcription termination/antitermination factor NusG n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DCI4_CLOSY
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:ERI77211.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcription antiterminator
Displaying 23 items

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