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L2_022_103G1_scaffold_526

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_526_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(383..1729)
DNA (1347bp) protein (449aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Erysipelotrichaceae RepID=B0N662_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EHQ44858.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
methyltransferase
L2_022_103G1_scaffold_526_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1767..2327)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RQ50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44857.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_103G1_scaffold_526_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2332..2511)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RNR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36431.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_526_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2561..3994)
DNA (1434bp) protein (478aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=4 Tax=Coprobacillus RepID=C3RQ49_9FIRM
L2_022_103G1_scaffold_526_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4000..5448)
DNA (1449bp) protein (483aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=5 Tax=Erysipelotrichaceae RepID=B0N659_9FIRM
L2_022_103G1_scaffold_526_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5448..5738)
DNA (291bp) protein (97aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=5 Tax=Erysipelotrichaceae RepID=B0N658_9FIRM
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase C subunit {ECO:0000313|EMBL:CCZ36434.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L2_022_103G1_scaffold_526_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5749..6822)
DNA (1074bp) protein (358aa)
CamS sex pheromone family protein n=3 Tax=Erysipelotrichaceae RepID=B0N657_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44853.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
yerH; alkaline D-peptidase family extracellular enzyme
L2_022_103G1_scaffold_526_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6867..8861)
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
DNA ligase n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AQT7_9FIRM
DNA ligase
L2_022_103G1_scaffold_526_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8940..11084)
DNA (2145bp) protein (715aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
pcrA1; ATP-dependent DNA helicase (EC:3.6.1.-)
UvrD/REP helicase n=5 Tax=Erysipelotrichaceae RepID=B0N655_9FIRM
L2_022_103G1_scaffold_526_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11234..12016)
DNA (783bp) protein (261aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N654_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS17292.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative DNA-binding protein
L2_022_103G1_scaffold_526_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12360..15512
DNA (3153bp) protein (1051aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RQ41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM88947.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_526_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15924..16841)
DNA (918bp) protein (306aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
pyrD_2; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit (EC:1.3.1.14)
Dihydroorotate dehydrogenase n=5 Tax=Erysipelotrichaceae RepID=B0N652_9FIRM
L2_022_103G1_scaffold_526_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16834..17589)
DNA (756bp) protein (252aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=4 Tax=Erysipelotrichaceae RepID=B0N651_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_103G1_scaffold_526_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17598..18866)
DNA (1269bp) protein (423aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RUB4_9FIRM
L2_022_103G1_scaffold_526_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18859..19731)
DNA (873bp) protein (291aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
pyrB; Aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=3 Tax=Erysipelotrichaceae RepID=B0N649_9FIRM
L2_022_103G1_scaffold_526_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19879..20367)
DNA (489bp) protein (163aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Phosphopantetheine adenylyltransferase n=5 Tax=Erysipelotrichaceae RepID=B0N648_9FIRM
coaD; phosphopantetheine adenylyltransferase
L2_022_103G1_scaffold_526_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20372..20545)
DNA (174bp) protein (58aa)
RNA methyltransferase, RsmD family n=5 Tax=Erysipelotrichaceae RepID=B0N647_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:CCZ36445.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying 17 items

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