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L2_022_103G1_scaffold_543

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_543_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..415)
DNA (414bp) protein (138aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYW1_BIFBU
AcrR family transcriptional regulator {ECO:0000313|EMBL:KEY30733.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Transcriptional regulator, TetR family
L2_022_103G1_scaffold_543_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(763..2154)
DNA (1392bp) protein (464aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1 n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F1LL52_BIFBU
cldC; Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1
L2_022_103G1_scaffold_543_3
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2184..4892)
DNA (2709bp) protein (903aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ28225.1}; Mannosidase {ECO:0000313|EMBL:KFI63444.1}; EC=3.2.1.25 {ECO:0000313|EMBL:KFI63444.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRH9_BIFBR
glycosyl hydrolase family 2, sugar binding domain protein
L2_022_103G1_scaffold_543_4
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4970..5914)
DNA (945bp) protein (315aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Alloscardovia omnicolens RepID=UPI0003B30E45
Putative sugar transport integral membrane protein {ECO:0000313|EMBL:KFJ03621.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
cldG; Cellodextrin transport system permease protein CebG
L2_022_103G1_scaffold_543_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5953..6972)
DNA (1020bp) protein (340aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q951_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EFM40774.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
sugar ABC transporter permease
L2_022_103G1_scaffold_543_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7086..8393)
DNA (1308bp) protein (436aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Parascardovia denticolens IPLA 20019 RepID=I8AQ35_PARDN
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY30736.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
cldE; Cellodextrin binding protein
L2_022_103G1_scaffold_543_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8621..9670)
DNA (1050bp) protein (350aa)
LacI family sucrose operon transcriptional repressor n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LG40_BIFBI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY30737.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
LacI family sucrose operon transcriptional repressor
L2_022_103G1_scaffold_543_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9986..11848
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWM5_BIFLN
argS; arginyl-tRNA synthetase
L2_022_103G1_scaffold_543_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11851..13443
DNA (1593bp) protein (531aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Diaminopimelate decarboxylase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL9_BIFLS
L2_022_103G1_scaffold_543_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13611..14927
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:ACJ53374.1}; EC=1.1.1.3 {ECO:0000313|EMBL:ACJ53374.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL8_BIFLS
homoserine dehydrogenase
L2_022_103G1_scaffold_543_11
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15021..16025
DNA (1005bp) protein (335aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FDK0_9BIFI
L2_022_103G1_scaffold_543_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16162..17616
DNA (1455bp) protein (485aa)
Maf protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL6_BIFLS
maf protein
Maf-like protein YceF {ECO:0000313|EMBL:CEF02100.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L2_022_103G1_scaffold_543_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18459..18569)
DNA (111bp) protein (37aa)
Toxin-antitoxin system, toxin component, GNAT family n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0W4_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44914.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_022_103G1_scaffold_543_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18560..18736)
DNA (177bp) protein (59aa)
Toxin-antitoxin system protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I384_BIFLN
Toxin-antitoxin system protein {ECO:0000313|EMBL:CCK35757.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L2_022_103G1_scaffold_543_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18779..18895)
DNA (117bp) protein (39aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=B3DPJ6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44913.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_022_103G1_scaffold_543_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19207..20691
DNA (1485bp) protein (495aa)
Putative transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL3_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53369.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying 16 items

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