ggKbase home page

L2_022_103G1_scaffold_555

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_555_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..141)
DNA (141bp) protein (47aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z821_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66385.1}; Flags: Fragment;; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_022_103G1_scaffold_555_2
unknown

Not on your lists

comp(157..387)
DNA (231bp) protein (77aa)

This feature has no annotations

L2_022_103G1_scaffold_555_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(458..1081)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA44_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08537.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_022_103G1_scaffold_555_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1078..1452)
DNA (375bp) protein (125aa)
Crossover junction endodeoxyribonuclease RusA {ECO:0000313|EMBL:EFD01275.1}; EC=3.1.22.4 {ECO:0000313|EMBL:EFD01275.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Crossover junction endodeoxyribonuclease RusA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AA97_9CLOT
endodeoxyribonuclease RusA
L2_022_103G1_scaffold_555_5
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1434..1781)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EX82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01401.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
L2_022_103G1_scaffold_555_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1880..2176)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G6X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11629.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L2_022_103G1_scaffold_555_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2169..2723)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA47_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08540.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_022_103G1_scaffold_555_8
Tetragenococcus muriaticus, Tetragenococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2723..3325)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Streptococcus phage SMP RepID=A1EAD0_9CAUD
Essential recombination function protein {ECO:0000313|EMBL:KFN92411.1}; TaxID=1302649 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Tetragenococcus.;" source="Tetragenococcus muriaticus PMC-11-5.;"
hypothetical protein
L2_022_103G1_scaffold_555_9

Not on your lists

comp(3322..3504)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9D664_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX08216.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L2_022_103G1_scaffold_555_10
unknown

Not on your lists

comp(3501..3653)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_022_103G1_scaffold_555_11
unknown

Not on your lists

comp(3726..4001)
DNA (276bp) protein (92aa)

This feature has no annotations

L2_022_103G1_scaffold_555_12
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3994..4236)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLL6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49349.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
L2_022_103G1_scaffold_555_13
unknown

Not on your lists

comp(4340..4492)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_022_103G1_scaffold_555_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4632..5501)
DNA (870bp) protein (290aa)
Band 7 protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z884_9CLOT
Band 7 protein {ECO:0000313|EMBL:CDD44508.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_022_103G1_scaffold_555_15
unknown

Not on your lists

comp(5501..5674)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_022_103G1_scaffold_555_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5684..6289)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65732.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_022_103G1_scaffold_555_17
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6989..7174)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U6A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64582.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_022_103G1_scaffold_555_18
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(7192..7962)
DNA (771bp) protein (257aa)
Antirepressor n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C3R8_9FIRM
Antirepressor {ECO:0000313|EMBL:CDD72726.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
phage antirepressor protein
L2_022_103G1_scaffold_555_19
Weissella oryzae, Weissella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8110..8331
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK30401.1}; TaxID=1329250 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Weissella.;" source="Weissella oryzae SG25.;"
L2_022_103G1_scaffold_555_20
unknown

Not on your lists

comp(8318..8473)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_022_103G1_scaffold_555_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(8463..8705)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R9H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35414.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_022_103G1_scaffold_555_22
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8917..9300
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Lactococcus garvieae RepID=UPI000369F1FB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF86100.1}; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
L2_022_103G1_scaffold_555_23
unknown

Not on your lists

comp(9282..9515)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_022_103G1_scaffold_555_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9559..9735)
DNA (177bp) protein (59aa)
DNA binding domain protein, excisionase family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8Y9_CLOSW
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADL03964.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_022_103G1_scaffold_555_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9906..10322
DNA (417bp) protein (139aa)
Helix-turn-helix n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVP1_9CLOT
Helix-turn-helix {ECO:0000313|EMBL:CDC47071.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Helix-turn-helix.
L2_022_103G1_scaffold_555_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10303..10524
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XGP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82122.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L2_022_103G1_scaffold_555_27
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

10586..11035
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29244.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L2_022_103G1_scaffold_555_28
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

11060..11818
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GUV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29243.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L2_022_103G1_scaffold_555_29
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12024..12506
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPM0_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48281.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
lysM domain protein
L2_022_103G1_scaffold_555_30
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12678..13853
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CLK7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49340.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Phage integrase family.
Displaying items 1-30 of 37 in total

View Taxonomy