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L2_022_103G1_scaffold_569

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_569_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..1208)
DNA (1206bp) protein (402aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Coprobacillus RepID=G9R3B6_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS19860.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L2_022_103G1_scaffold_569_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1210..1320)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AP71_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHM90785.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_569_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1552..1923
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N299_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33775.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_569_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1945..2913
DNA (969bp) protein (323aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N298_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33773.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_569_5
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2962..3822)
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N297_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45352.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_103G1_scaffold_569_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3819..4553)
DNA (735bp) protein (245aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RJ75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33770.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Uncharacterized protein involved in copper resistance
L2_022_103G1_scaffold_569_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4569..5669)
DNA (1101bp) protein (367aa)
Putative dipeptidase n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ74_9FIRM
Putative dipeptidase {ECO:0000313|EMBL:CCZ33768.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dipeptidase, putative
L2_022_103G1_scaffold_569_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5671..6627)
DNA (957bp) protein (319aa)
glycosylasparaginase precursor. Threonine peptidase. MEROPS family T02 (EC:3.5.1.26 3.5.1.1)
Asparaginase n=5 Tax=Erysipelotrichaceae RepID=B0N294_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90791.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_569_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6686..7207)
DNA (522bp) protein (174aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (EC:1.21.4.2)
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B n=2 Tax=Coprobacillus RepID=H1AP46_9FIRM
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B {ECO:0000313|EMBL:EHQ45348.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_103G1_scaffold_569_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7219..8586)
DNA (1368bp) protein (456aa)
PTS system, lactose/cellobiose family IIC component n=3 Tax=Coprobacillus RepID=C3RJ71_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system, lactose/cellobiose family IIC component
L2_022_103G1_scaffold_569_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8603..8923)
DNA (321bp) protein (107aa)
PTS system cellobiose-specific transporter subunit IIB (EC:2.7.1.69)
PTS system lactose/cellobiose family IIB component n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RLG6_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDS19851.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_103G1_scaffold_569_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8948..9271)
DNA (324bp) protein (108aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIA subunit n=2 Tax=Erysipelotrichaceae RepID=B0N290_9FIRM
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EDS19850.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_103G1_scaffold_569_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9358..9936)
DNA (579bp) protein (193aa)
RDD family protein n=2 Tax=Erysipelotrichaceae RepID=B0N289_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90796.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
RDD family.
L2_022_103G1_scaffold_569_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9947..11854)
DNA (1908bp) protein (636aa)
PRD domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N288_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45343.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
BigG family transcription antiterminator
L2_022_103G1_scaffold_569_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12022..12372
DNA (351bp) protein (117aa)
Transcriptional regulator, Spx/MgsR family n=5 Tax=Erysipelotrichaceae RepID=B0N287_9FIRM
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:CCZ33754.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_569_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12372..13157
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R3D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45341.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_103G1_scaffold_569_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13360..14121
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AP38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45340.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L2_022_103G1_scaffold_569_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14135..15358
DNA (1224bp) protein (408aa)
Transporter, major facilitator family protein n=2 Tax=Erysipelotrichaceae RepID=B0N284_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDS19844.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Permeases of the major facilitator superfamily
L2_022_103G1_scaffold_569_19
unknown

Not on your lists

15401..15580
DNA (180bp) protein (60aa)

This feature has no annotations

L2_022_103G1_scaffold_569_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15531..16907
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90802.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_569_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16888..18273
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90803.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_569_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18491..18691
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N280_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90804.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_569_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18672..18935
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N279_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19839.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L2_022_103G1_scaffold_569_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18941..19147)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N278_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33743.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying 24 items

View Taxonomy