ggKbase home page

L2_022_103G1_scaffold_578

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_578_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2014
DNA (2013bp) protein (671aa)
Putative invasin n=7 Tax=Escherichia coli RepID=F5MC48_ECOLX
Putative adhesin/invasin {ECO:0000313|EMBL:EGI17296.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
hypothetical protein
L2_022_103G1_scaffold_578_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2051..3094)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=58 Tax=Escherichia RepID=L2ZWJ2_ECOLX
Aes
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:KEJ62859.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_022_103G1_scaffold_578_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3542..3997
DNA (456bp) protein (152aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=I4S730_ECOLX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI17298.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_022_103G1_scaffold_578_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3997..4167
DNA (171bp) protein (57aa)
Uncharacterized protein n=180 Tax=Escherichia coli RepID=B7N9B4_ECOLU
ninE; prophage protein NinE
Putative ninE protein {ECO:0000313|EMBL:KEJ62861.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_022_103G1_scaffold_578_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4160..4450
DNA (291bp) protein (97aa)
Predicted protein n=83 Tax=Escherichia coli RepID=C6EKE3_ECOBD
ybcO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDH00569.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L2_022_103G1_scaffold_578_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4447..4809
DNA (363bp) protein (121aa)
Crossover junction endodeoxyribonuclease rusA {ECO:0000256|PIRNR:PIRNR001007}; EC=3.1.22.4 {ECO:0000256|PIRNR:PIRNR001007};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Crossover junction endodeoxyribonuclease rusA n=34 Tax=Escherichia coli RepID=G0D6X5_ECOLX
crossover junction endodeoxyribonuclease RusA
L2_022_103G1_scaffold_578_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4809..4946
DNA (138bp) protein (46aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=N1N5S1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO83093.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_103G1_scaffold_578_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4943..5632
DNA (690bp) protein (230aa)
Antitermination protein Q n=32 Tax=Escherichia coli RepID=L2ZYK9_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Phage antitermination protein Q {ECO:0000313|EMBL:CDN81619.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L2_022_103G1_scaffold_578_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5954..6259
DNA (306bp) protein (102aa)
Gp13 n=278 Tax=Escherichia coli RepID=B5YXF0_ECO5E
gp13
Holin {ECO:0000313|EMBL:KDV38346.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_022_103G1_scaffold_578_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6246..6722
DNA (477bp) protein (159aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Lysozyme n=33 Tax=Escherichia coli RepID=G0D6X9_ECOLX
Phage lysin
L2_022_103G1_scaffold_578_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6719..7180
DNA (462bp) protein (154aa)
Outer membrane lipoprotein Rz1 lambdoid prophage Rac n=33 Tax=Escherichia coli RepID=L2ZWI5_ECOLX
endopeptidase
Endopeptidase {ECO:0000313|EMBL:AJO83097.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_103G1_scaffold_578_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7212..7505)
DNA (294bp) protein (98aa)
Lipoprotein bor homolog from lambdoid prophage DLP12 n=293 Tax=Escherichia RepID=E2QKQ1_ECOLX
bor; lambda prophage Bor protein
Lipoprotein bor {ECO:0000313|EMBL:KEJ47871.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_022_103G1_scaffold_578_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7986..8312
DNA (327bp) protein (109aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=419 Tax=Escherichia RepID=E2QKQ2_ECOLX
tonB-like membrane protein
TonB family domain-containing protein {ECO:0000313|EMBL:ELE61756.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L2_022_103G1_scaffold_578_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8676..8927)
DNA (252bp) protein (84aa)
Uncharacterized protein n=9 Tax=Escherichia coli RepID=E9U6Y0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AJO86578.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L2_022_103G1_scaffold_578_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9265..9810
DNA (546bp) protein (182aa)
Terminase small subunit n=31 Tax=Escherichia coli RepID=G0D6Y5_ECOLX
terminase small subunit
Uncharacterized protein {ECO:0000313|EMBL:AJO83102.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_022_103G1_scaffold_578_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9785..11710
DNA (1926bp) protein (642aa)
Large terminase n=8 Tax=Escherichia coli RepID=L2WRT9_ECOLX
Large terminase {ECO:0000313|EMBL:EQP56863.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
phage DNA packaging protein large subunit
L2_022_103G1_scaffold_578_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11707..11913
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Lambda prophage-derived head-to-tail joining protein W
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_022_103G1_scaffold_578_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11910..13511
DNA (1602bp) protein (534aa)
Capsid structural protein of prophage n=37 Tax=Escherichia coli RepID=E2QKQ6_ECOLX
Portal protein B {ECO:0000313|EMBL:EQP56865.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
capsid structural protein of prophage
L2_022_103G1_scaffold_578_19
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13492..14823
DNA (1332bp) protein (444aa)
Minor capsid protein C n=7 Tax=Escherichia coli RepID=L2WT53_ECOLX
Minor capsid protein C {ECO:0000313|EMBL:ELC20362.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
minor capsid protein C from bacteriophage origin
L2_022_103G1_scaffold_578_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14833..15165
DNA (333bp) protein (111aa)
Head decoration protein (Major capsid protein) n=124 Tax=Escherichia coli RepID=E2QKQ8_ECOLX
head decoration protein (Major capsid protein D) from bacteriophage origin
Head decoration protein (Major capsid protein D) from bacteriophage origin {ECO:0000313|EMBL:AEQ12601.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L2_022_103G1_scaffold_578_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15221..15496
DNA (276bp) protein (92aa)
Major head protein (Major coat protein) from bacteriophage origin n=3 Tax=Escherichia coli RepID=E4P1T6_ECO8N
major head protein (Major coat protein) from bacteriophage origin
Major head protein {ECO:0000313|EMBL:EOV98758.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L2_022_103G1_scaffold_578_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..16864
DNA (1236bp) protein (412aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=L3H2B8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV98757.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
putative integrase of prophage
L2_022_103G1_scaffold_578_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16866..17093
DNA (228bp) protein (76aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=L3GZN7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQV93316.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
Putative DNA binding protein from phage origin
L2_022_103G1_scaffold_578_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17081..18004
DNA (924bp) protein (308aa)
Nucleic acid-binding protein n=5 Tax=Escherichia coli RepID=I4T266_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQV93317.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
nucleic acid-binding protein
L2_022_103G1_scaffold_578_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18390..18755
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=I4T268_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQV93319.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
hypothetical protein
L2_022_103G1_scaffold_578_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18748..18912
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=B7NL36_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO04696.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
Displaying 26 items

View Taxonomy