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L2_022_103G1_scaffold_579

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_579_1
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..1215)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002F7EC5F
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ETT65444.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
hypothetical protein
L2_022_103G1_scaffold_579_2
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1202..2002)
DNA (801bp) protein (267aa)
deoxyribose-phosphate aldolase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAEC
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000313|EMBL:GAE86718.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
L2_022_103G1_scaffold_579_3
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2023..3117)
DNA (1095bp) protein (365aa)
3-dehydroquinate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2FAE2
3,7-dideoxy-D-threo-hepto-2, 6-diulosonate synthase {ECO:0000313|EMBL:GAE86733.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
3-dehydroquinate synthase
L2_022_103G1_scaffold_579_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3133..4014)
DNA (882bp) protein (294aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7D1_9CLOT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGD49379.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
glycosyl transferase family protein
L2_022_103G1_scaffold_579_5

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comp(4007..5104)
DNA (1098bp) protein (366aa)
Radical SAM protein n=1 Tax=uncultured bacterium RepID=K1XRQ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL83670.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Radical SAM domain-containing protein
L2_022_103G1_scaffold_579_6
unknown

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comp(5106..6065)
DNA (960bp) protein (320aa)

This feature has no annotations

L2_022_103G1_scaffold_579_7
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(6140..6688)
DNA (549bp) protein (183aa)
uridine kinase id=3761187 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
uridine kinase
Tax=GWF2_Clostridiales_36_10_curated
L2_022_103G1_scaffold_579_8
unknown

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comp(7101..7268)
DNA (168bp) protein (56aa)

This feature has no annotations

L2_022_103G1_scaffold_579_9
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8247..9278
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6M1P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AKG34761.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
L2_022_103G1_scaffold_579_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9438..10685
DNA (1248bp) protein (416aa)
Transposase n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WQ48_9FIRM
Transposase {ECO:0000313|EMBL:EGX75628.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
transposase mutator type
L2_022_103G1_scaffold_579_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13149..13319)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9P4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80025.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_022_103G1_scaffold_579_12
unknown

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comp(13352..13834)
DNA (483bp) protein (161aa)

This feature has no annotations

L2_022_103G1_scaffold_579_13
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13835..14551)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NA83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80023.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Response regulator of the LytR/AlgR family
L2_022_103G1_scaffold_579_14
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14556..14894)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NJ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80022.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
helix-turn-helix domain-containing protein
L2_022_103G1_scaffold_579_15
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15064..15243
DNA (180bp) protein (60aa)
Cyclic lactone autoinducer peptide n=1 Tax=Dorea sp. 5-2 RepID=R9NAM4_9FIRM
Cyclic lactone autoinducer peptide {ECO:0000313|EMBL:EOS80021.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_022_103G1_scaffold_579_16
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15248..15829
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80020.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L2_022_103G1_scaffold_579_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16134..16517
DNA (384bp) protein (128aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGG82388.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
DNA-directed RNA polymerase specialized sigma subunit
L2_022_103G1_scaffold_579_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17460..17666)
DNA (207bp) protein (69aa)
Predicted transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRQ7_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL40482.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_022_103G1_scaffold_579_19
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17680..18015)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31945.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_022_103G1_scaffold_579_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18358..18996)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XHR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19153.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted transcriptional regulator
Displaying 20 items

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