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L2_022_103G1_scaffold_588

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_588_1
unknown

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2..67
DNA (66bp) protein (22aa)

This feature has no annotations

L2_022_103G1_scaffold_588_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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69..977
DNA (909bp) protein (303aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
trxB; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=5 Tax=Erysipelotrichaceae RepID=B0N1L0_9FIRM
L2_022_103G1_scaffold_588_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(974..1846)
DNA (873bp) protein (291aa)
LysR substrate binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94346.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
LysR substrate binding domain family protein
L2_022_103G1_scaffold_588_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1965..3005
DNA (1041bp) protein (347aa)
Sulfite reductase, subunit A n=4 Tax=Erysipelotrichaceae RepID=B0N1K8_9FIRM
Sulfite reductase, subunit A {ECO:0000313|EMBL:EHM94347.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
sulfite reductase
L2_022_103G1_scaffold_588_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2998..3792
DNA (795bp) protein (265aa)
Sulfite reductase, subunit B n=4 Tax=Erysipelotrichaceae RepID=B0N1K7_9FIRM
Sulfite reductase, subunit B {ECO:0000313|EMBL:EHM94348.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L2_022_103G1_scaffold_588_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3805..4842
DNA (1038bp) protein (346aa)
Sulfite reductase, subunit C n=3 Tax=Erysipelotrichaceae RepID=B0N1K6_9FIRM
Sulfite reductase, subunit C {ECO:0000313|EMBL:EHM94349.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
asrC; sulfite reductase, subunit C
L2_022_103G1_scaffold_588_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4873..6063
DNA (1191bp) protein (397aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|SAAS:SAAS00041125};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.-)
Glutamyl-tRNA reductase n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANG1_9FIRM
L2_022_103G1_scaffold_588_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6060..6953
DNA (894bp) protein (298aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hemC; porphobilinogen deaminase HemC (EC:2.5.1.61)
Porphobilinogen deaminase n=3 Tax=Erysipelotrichaceae RepID=B0N1M7_9FIRM
L2_022_103G1_scaffold_588_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6943..8379
DNA (1437bp) protein (479aa)
uroporphyrin-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N1M6_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EHM94352.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_022_103G1_scaffold_588_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8369..9346
DNA (978bp) protein (326aa)
hemB; porphobilinogen synthase (EC:4.2.1.24)
Porphobilinogen synthase n=4 Tax=Erysipelotrichaceae RepID=B0N1M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45806.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_103G1_scaffold_588_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9339..10634
DNA (1296bp) protein (432aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Erysipelotrichaceae RepID=B0N1M4_9FIRM
L2_022_103G1_scaffold_588_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10615..11739
DNA (1125bp) protein (375aa)
Siroheme synthase domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1M3_9FIRM
Siroheme synthase domain-containing protein {ECO:0000313|EMBL:EHM94355.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cysG; sirohaem synthase
L2_022_103G1_scaffold_588_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11799..12374
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 n=3 Tax=Coprobacillus RepID=C3RIX0_9FIRM
Uracil-DNA glycosylase family 4 {ECO:0000313|EMBL:CCZ36792.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
uracil-DNA glycosylase superfamily protein
L2_022_103G1_scaffold_588_14
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12447..13382
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N1K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45802.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_103G1_scaffold_588_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13461..14885)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RIX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36790.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
flotillin
L2_022_103G1_scaffold_588_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14901..16019)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45800.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L2_022_103G1_scaffold_588_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16214..17089
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein CLORAM_00485 n=4 Tax=Erysipelotrichaceae RepID=B0N1K0_9FIRM
Nucleotide-binding protein CLORAM_00485 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
nucleotide-binding protein
L2_022_103G1_scaffold_588_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17098..18045
DNA (948bp) protein (316aa)
Putative sporulation transcription regulator WhiA n=5 Tax=Erysipelotrichaceae RepID=B0N1J9_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L2_022_103G1_scaffold_588_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18047..18259
DNA (213bp) protein (71aa)
DNA-binding helix-turn-helix protein n=5 Tax=Erysipelotrichaceae RepID=B0N1J8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ36787.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcription regulator protein
L2_022_103G1_scaffold_588_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18299..18586
DNA (288bp) protein (96aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N1J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36786.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying 20 items

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