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L2_022_103G1_scaffold_633

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_633_1
unknown

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120..287
DNA (168bp) protein (56aa)

This feature has no annotations

L2_022_103G1_scaffold_633_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1018..2361
DNA (1344bp) protein (448aa)
PGA biosynthesis protein n=4 Tax=Bifidobacterium bifidum RepID=I3WJT0_BIFBI
capA; PGA biosynthesis protein
Putative enzyme of poly-gamma-glutamate biosynthesis {ECO:0000313|EMBL:KFI43890.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_103G1_scaffold_633_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2345..2983
DNA (639bp) protein (213aa)
Thymidylate synthase n=4 Tax=Bifidobacterium RepID=E4NZ75_BIFBP
thymidylate synthase
Thymidylate synthase {ECO:0000313|EMBL:KFI43889.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_022_103G1_scaffold_633_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3123..3857
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMI1_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53720.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_633_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4030..6198
DNA (2169bp) protein (723aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
4-alpha-glucanotransferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I8T5_BIFBI
malQ; 4-alpha-glucanotransferase
L2_022_103G1_scaffold_633_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6461..6910
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=6 Tax=Bifidobacterium RepID=E3EMH9_BIFBS
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_103G1_scaffold_633_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6932..7423
DNA (492bp) protein (164aa)
30S ribosomal protein S9 n=7 Tax=Bifidobacterium RepID=E3EMH8_BIFBS
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_022_103G1_scaffold_633_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7502..10087)
DNA (2586bp) protein (862aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
Glycogen debranching protein n=2 Tax=Bifidobacterium RepID=K2M538_BIFBI
glgX; glycogen debranching protein
L2_022_103G1_scaffold_633_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10084..11301)
DNA (1218bp) protein (406aa)
ROK family protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUZ1_BIFBI
ROK family protein {ECO:0000313|EMBL:EKE51348.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
ROK family protein
L2_022_103G1_scaffold_633_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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11712..14444
DNA (2733bp) protein (911aa)
adh; aldehyde-alcohol dehydrogenase (EC:1.2.1.10)
Aldehyde-alcohol dehydrogenase n=4 Tax=Bifidobacterium bifidum RepID=I3WJS2_BIFBI
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_022_103G1_scaffold_633_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(14638..15522)
DNA (885bp) protein (295aa)
Alpha-acetolactate decarboxylase n=2 Tax=Bifidobacterium RepID=K2IRB9_BIFBI
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:CDB24010.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
aldB; alpha-acetolactate decarboxylase
L2_022_103G1_scaffold_633_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15590..16087)
DNA (498bp) protein (166aa)
Conserved hypothetical membrane protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GQT1_9BIFI
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CDB24009.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_022_103G1_scaffold_633_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16084..16635)
DNA (552bp) protein (184aa)
Bacterial group 3 Ig-like protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CDD3_BIFBI
GalA Glycosyl hydrolases family 53, Endogalactanase {ECO:0000313|EMBL:KFI43879.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_022_103G1_scaffold_633_14
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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17261..17335
DNA (75bp) protein (25aa)
30S ribosomal protein S10 n=2 Tax=Bifidobacterium RepID=K4IQ37_BIFAP
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=518635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum DSM 20098 = JCM 7096.;"
Displaying 14 items

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