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L2_022_103G1_scaffold_639

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_639_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1..432)
DNA (432bp) protein (144aa)
50S ribosomal protein L15 n=7 Tax=Clostridium RepID=A8S1E6_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
50S ribosomal protein L15
L2_022_103G1_scaffold_639_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(458..640)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=16 Tax=Clostridium RepID=A8S1E7_9CLOT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
LSU ribosomal protein L30P
L2_022_103G1_scaffold_639_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(656..1165)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=17 Tax=Clostridium RepID=A8S1E8_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
SSU ribosomal protein S5P
L2_022_103G1_scaffold_639_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1183..1551)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=16 Tax=Clostridium RepID=A8S1E9_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
50S ribosomal protein L18
L2_022_103G1_scaffold_639_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1569..2111)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=7 Tax=Clostridium RepID=N9X3N2_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
LSU ribosomal protein L6P
L2_022_103G1_scaffold_639_6
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2185..2586)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=16 Tax=Clostridium RepID=A8S1F1_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
30S ribosomal protein S8
L2_022_103G1_scaffold_639_7
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2619..2804)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=18 Tax=Clostridium RepID=D9QZP8_CLOSW
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_022_103G1_scaffold_639_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2822..3361)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Clostridiales RepID=C5EVN8_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
50S ribosomal protein L5
L2_022_103G1_scaffold_639_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3385..3690)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=5 Tax=Clostridium RepID=A8S1F3_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
50S ribosomal protein L24
L2_022_103G1_scaffold_639_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3703..4071)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=7 Tax=Clostridium RepID=A8S1F4_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
50S ribosomal protein L14
L2_022_103G1_scaffold_639_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4096..4371)
DNA (276bp) protein (92aa)
30S ribosomal protein S17 n=8 Tax=Clostridium RepID=A8S1F5_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
30S ribosomal protein S17
L2_022_103G1_scaffold_639_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4371..4574)
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=17 Tax=Clostridium RepID=A8S1F6_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
50S ribosomal protein L29
L2_022_103G1_scaffold_639_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4564..5001)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=16 Tax=Clostridium RepID=A8S1F7_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
LSU ribosomal protein L16P
L2_022_103G1_scaffold_639_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5001..5657)
DNA (657bp) protein (219aa)
30S ribosomal protein S3 n=7 Tax=Clostridium RepID=A8S1F8_9CLOT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
30S ribosomal protein S3
L2_022_103G1_scaffold_639_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5667..6053)
DNA (387bp) protein (129aa)
50S ribosomal protein L22 n=17 Tax=Clostridium RepID=A8S1F9_9CLOT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
50S ribosomal protein L22
L2_022_103G1_scaffold_639_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6084..6368)
DNA (285bp) protein (95aa)
30S ribosomal protein S19 n=18 Tax=Clostridium RepID=A8S1G0_9CLOT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
30S ribosomal protein S19
L2_022_103G1_scaffold_639_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6389..7234)
DNA (846bp) protein (282aa)
50S ribosomal protein L2 n=7 Tax=Clostridium RepID=N9YPR2_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
LSU ribosomal protein L2P
L2_022_103G1_scaffold_639_18
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7354..7653)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=16 Tax=Clostridium RepID=A8S1G2_9CLOT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
50S ribosomal protein L25
L2_022_103G1_scaffold_639_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7653..8273)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=4 Tax=Clostridium bolteae RepID=A8S1G3_9CLOT
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
LSU ribosomal protein L4P
L2_022_103G1_scaffold_639_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8302..8937)
DNA (636bp) protein (212aa)
50S ribosomal protein L3 n=14 Tax=Clostridium RepID=A8S1G4_9CLOT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
50S ribosomal protein L3, bacterial
L2_022_103G1_scaffold_639_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9186..9503)
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=19 Tax=Clostridiales RepID=A8S1G6_9CLOT
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SSU ribosomal protein S10P
L2_022_103G1_scaffold_639_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9985..11340)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S1G8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13789.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
cell wall binding repeat-containing protein
L2_022_103G1_scaffold_639_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11593..12453
DNA (861bp) protein (287aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S1G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00696.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Predicted SAM-dependent methyltransferases
L2_022_103G1_scaffold_639_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12558..13247)
DNA (690bp) protein (230aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S1H0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13791.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
rraA2; dimethylmenaquinone methyltransferase
L2_022_103G1_scaffold_639_25
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13297..14379)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S1H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00694.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
glycerol dehydrogenase-like oxidoreductase
L2_022_103G1_scaffold_639_26
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14415..15197)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F733_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00693.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
transcriptional regulator
L2_022_103G1_scaffold_639_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15271..16554)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8S1H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00692.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
trap-type c4-dicarboxylate transport system, large permease component
L2_022_103G1_scaffold_639_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16551..17030)
DNA (480bp) protein (160aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=R0AAK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00691.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
trap-type c4-dicarboxylate transport system, small permease component
L2_022_103G1_scaffold_639_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17059..17193)
DNA (135bp) protein (45aa)
DctP family TRAP transporter solute receptor n=2 Tax=Clostridium RepID=N9YWW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13796.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Displaying 29 items

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