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L2_022_103G1_scaffold_689

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_103G1_scaffold_689_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..666)
DNA (666bp) protein (222aa)
RelA/spoT family protein n=4 Tax=Clostridium butyricum RepID=B1QZ03_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35517.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_022_103G1_scaffold_689_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

802..1476
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T999_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJH01674.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_022_103G1_scaffold_689_3
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1552..2514
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03241.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
methyl-accepting chemotaxis sensory transducer
L2_022_103G1_scaffold_689_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2567..3253)
DNA (687bp) protein (229aa)
Ser/threonine protein phosphatase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3P5_CLOPA
Ser/threonine protein phosphatase {ECO:0000313|EMBL:ETD70721.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
metallophosphoesterase
L2_022_103G1_scaffold_689_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3261..3524)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U407_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55377.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
flagella-associated protein
L2_022_103G1_scaffold_689_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3589..5457)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXI0_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIL07963.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_022_103G1_scaffold_689_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5586..6215
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W1_9CLOT
Potassium transporter TrkA {ECO:0000313|EMBL:KJU72063.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
trkA-C domain protein
L2_022_103G1_scaffold_689_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6290..7510)
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Clostridium botulinum B RepID=SYY_CLOBB
L2_022_103G1_scaffold_689_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7653..8063)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYQ9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72065.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
L2_022_103G1_scaffold_689_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8460..9539)
DNA (1080bp) protein (360aa)
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E9A8B7
Histidine kinase {ECO:0000313|EMBL:ETD70728.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
diguanylate cyclase
L2_022_103G1_scaffold_689_11
unknown

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comp(9613..9705)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_022_103G1_scaffold_689_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9674..10789)
DNA (1116bp) protein (372aa)
Ger(X)C family germination protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6N8_9CLOT
Ger(X)C family germination protein {ECO:0000313|EMBL:EEH96888.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore germination protein
L2_022_103G1_scaffold_689_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10770..12191)
DNA (1422bp) protein (474aa)
Spore germination protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UYN0_CLOBA
Spore gernimation protein GerK {ECO:0000313|EMBL:KJU72068.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
GerA spore germination family protein
L2_022_103G1_scaffold_689_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12285..13367
DNA (1083bp) protein (361aa)
Spore germination protein (Amino acid permease) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K4_9CLOT
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EEH96886.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore germination family protein
L2_022_103G1_scaffold_689_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13517..13678
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q942_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24426.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_022_103G1_scaffold_689_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13833..14387)
DNA (555bp) protein (185aa)
UPI0003D61D50 related cluster n=1 Tax=unknown RepID=UPI0003D61D50
membrane spanning protein
Membrane protein {ECO:0000313|EMBL:KHD16430.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_022_103G1_scaffold_689_17
unknown

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14528..14695
DNA (168bp) protein (56aa)

This feature has no annotations

L2_022_103G1_scaffold_689_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14800..15813
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
Tryptophan--tRNA ligase n=1 Tax=Clostridium novyi (strain NT) RepID=A0PYI6_CLONN
trpS; tryptophanyl-tRNA synthetase
L2_022_103G1_scaffold_689_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15837..16001)
DNA (165bp) protein (55aa)
gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UTP--glucose-1-phosphate uridylyltransferase GtaB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX22_CLOSA
Displaying 19 items

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