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L2_022_366G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_50_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(327..482)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TX75_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS54839.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_022_366G1_scaffold_50_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(712..2766)
DNA (2055bp) protein (685aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=2 Tax=Bacteroides RepID=C6Z9J7_9BACE
L2_022_366G1_scaffold_50_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2824..3321
DNA (498bp) protein (166aa)
Phosphodiesterase family protein n=3 Tax=Bacteroides RepID=D1K6F7_9BACE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:EFV66869.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_022_366G1_scaffold_50_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3370..4509
DNA (1140bp) protein (380aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
dTDP-glucose 4,6-dehydratase n=6 Tax=Bacteroides RepID=A6KX54_BACV8
dTDP-glucose 4,6-dehydratase
L2_022_366G1_scaffold_50_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4980..8072
DNA (3093bp) protein (1031aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=Bacteroides RepID=C6Z9K0_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDF17454.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_022_366G1_scaffold_50_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8085..9902
DNA (1818bp) protein (606aa)
SusD family protein n=4 Tax=root RepID=C6Z9K1_9BACE
hypothetical protein
SusD family protein {ECO:0000313|EMBL:EET17560.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_022_366G1_scaffold_50_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10089..13319)
DNA (3231bp) protein (1077aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Glycoside hydrolase family 2 n=2 Tax=Bacteroides RepID=E5UVD7_9BACE
glycoside hydrolase
L2_022_366G1_scaffold_50_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13375..15444)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=2 Tax=root RepID=I9TWF3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74061.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
glycoside hydrolase
L2_022_366G1_scaffold_50_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15476..17011)
DNA (1536bp) protein (512aa)
SusD family protein n=4 Tax=Bacteroides RepID=C6Z9K4_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS54849.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_022_366G1_scaffold_50_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17032..20448)
DNA (3417bp) protein (1139aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=root RepID=I9IKV5_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY74059.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_022_366G1_scaffold_50_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20535..21521)
DNA (987bp) protein (329aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=C6ZAC3_9BACE
anti-sigma factor
FecR family protein {ECO:0000313|EMBL:KDS54851.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_022_366G1_scaffold_50_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21651..22232)
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor n=6 Tax=Bacteroides RepID=D4VC73_BACVU
RNA polymerase ECF-type sigma factor
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR38026.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_022_366G1_scaffold_50_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22272..23906)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I9TWE9_BACVU
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY74056.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_022_366G1_scaffold_50_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24022..25692)
DNA (1671bp) protein (557aa)
TrkA C-terminal domain protein n=7 Tax=root RepID=C6ZAC0_9BACE
hypothetical protein
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EIY74055.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_022_366G1_scaffold_50_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25978..27888
DNA (1911bp) protein (637aa)
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:KDS54855.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KDS54855.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Methylmalonyl-CoA mutase, small subunit n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IKV2_BACVU
methylmalonyl-CoA mutase small subunit
L2_022_366G1_scaffold_50_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27898..30048
DNA (2151bp) protein (717aa)
Methylmalonyl-CoA mutase N-terminal domain protein {ECO:0000313|EMBL:KDS54856.1}; EC=5.4.99.- {ECO:0000313|EMBL:KDS54856.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TX61_BACVU
L2_022_366G1_scaffold_50_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30371..31861)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZGD2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74052.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
starch-binding protein
L2_022_366G1_scaffold_50_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31875..35120)
DNA (3246bp) protein (1082aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TWE5_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY74051.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
collagen-binding protein
L2_022_366G1_scaffold_50_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35561..35923)
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZEX5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74050.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_022_366G1_scaffold_50_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36068..38377)
DNA (2310bp) protein (770aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H7T6_BACVU
Cna B-type domain protein {ECO:0000313|EMBL:KDS54861.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_022_366G1_scaffold_50_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38548..40044
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroides RepID=C6ZAB3_9BACE
two-component system sensor histidine kinase
L2_022_366G1_scaffold_50_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40163..41356)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9TWE0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74046.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
membrane transport protein
L2_022_366G1_scaffold_50_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41473..44589)
DNA (3117bp) protein (1039aa)
RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein n=5 Tax=root RepID=D4VBJ3_BACVU
cation efflux pump
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY74045.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_022_366G1_scaffold_50_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44594..45724)
DNA (1131bp) protein (377aa)
Cation efflux pump n=6 Tax=Bacteroides RepID=E5UVB9_9BACE
cation efflux pump
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIY74044.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_022_366G1_scaffold_50_25
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45779..47176)
DNA (1398bp) protein (466aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=3 Tax=Bacteroides RepID=C6ZAA9_9BACE
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EET17818.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
outer membrane efflux protein oprM
L2_022_366G1_scaffold_50_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47308..47850)
DNA (543bp) protein (181aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX76_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS00098.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_022_366G1_scaffold_50_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48004..48825)
DNA (822bp) protein (274aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Signal peptidase I n=3 Tax=Bacteroides RepID=C6ZAA7_9BACE
signal peptidase I
L2_022_366G1_scaffold_50_28
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48822..49400)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HFZ9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EFV66923.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_022_366G1_scaffold_50_29
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49397..49885)
DNA (489bp) protein (163aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KX79_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17430.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_022_366G1_scaffold_50_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50860..51171)
DNA (312bp) protein (104aa)
DNA binding domain, excisionase family n=18 Tax=root RepID=A7ALT2_9PORP
hypothetical protein
Putative DNA binding protein {ECO:0000313|EMBL:CDF17429.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Displaying items 1-30 of 101 in total

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