ggKbase home page

L2_022_366G1_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_167_1
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(723..1289)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZXD4_ORNRL
Uncharacterized protein {ECO:0000313|EMBL:KGN80506.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
L2_022_366G1_scaffold_167_2
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1377..1865)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CJ11_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM89993.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
L2_022_366G1_scaffold_167_3
unknown

Not on your lists

comp(1878..2444)
DNA (567bp) protein (189aa)

This feature has no annotations

L2_022_366G1_scaffold_167_4
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2441..2845)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YLU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA22381.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L2_022_366G1_scaffold_167_5
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2965..4062
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7N0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66421.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
GSCFA family protein
L2_022_366G1_scaffold_167_6
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4116..6584
DNA (2469bp) protein (823aa)
Alanine racemase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X4R3_9PORP
alanine racemase
Alanine racemase {ECO:0000313|EMBL:AHF12286.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_167_7
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6668..6997)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY39485.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
transcriptional regulator
L2_022_366G1_scaffold_167_8
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7002..8024)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X4T6_9PORP
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AHF12298.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_167_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8185..10806
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Alanine--tRNA ligase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F274_9BACE
alanyl-tRNA synthetase
L2_022_366G1_scaffold_167_10
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10913..11122)
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=2 Tax=root RepID=B0MYM8_9BACT
Transcriptional regulator {ECO:0000313|EMBL:KIO47509.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
transcriptional regulator
L2_022_366G1_scaffold_167_11
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11630..12397)
DNA (768bp) protein (256aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DEU1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD88915.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
membrane protein
L2_022_366G1_scaffold_167_12
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12401..13255)
DNA (855bp) protein (285aa)
Dihydropteroate synthase n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S7D7_9PORP
Dihydropteroate synthase {ECO:0000313|EMBL:EHL82010.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
dihydropteroate synthase
L2_022_366G1_scaffold_167_13
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13343..14689)
DNA (1347bp) protein (449aa)
Transporter n=2 Tax=Tannerella RepID=G9S7D9_9PORP
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
Na+-dependent transporter
L2_022_366G1_scaffold_167_14
unknown

Not on your lists

comp(14699..14989)
DNA (291bp) protein (97aa)

This feature has no annotations

L2_022_366G1_scaffold_167_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15019..16365)
DNA (1347bp) protein (449aa)
Transporter n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XRG2_9PORP
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Na+-dependent transporter
L2_022_366G1_scaffold_167_16
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16542..16946
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66439.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_022_366G1_scaffold_167_17
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17055..17747)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00031D59C6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD56474.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
L2_022_366G1_scaffold_167_18
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17810..18679)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEY7_9PORP
phosphorylase
Phosphorylase {ECO:0000313|EMBL:AHF12307.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_167_19
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18934..20337)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XRG9_9PORP
alpha-amylase
Alpha-amylase {ECO:0000313|EMBL:AHF12308.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_167_20
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20370..21632)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I3B4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY36568.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
4-alpha-glucanotransferase
L2_022_366G1_scaffold_167_21
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21637..23580)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X4V5_9PORP
4-alpha-glucanotransferase
4-alpha-glucanotransferase {ECO:0000313|EMBL:AHF12310.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_167_22
unknown

Not on your lists

comp(23601..23699)
DNA (99bp) protein (33aa)

This feature has no annotations

L2_022_366G1_scaffold_167_23
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23875..24471)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I3Q5_9PORP
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
membrane protein
L2_022_366G1_scaffold_167_24
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24611..25318
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5II74_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM48625.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L2_022_366G1_scaffold_167_25
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25412..26131)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZT45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ71007.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
L2_022_366G1_scaffold_167_26
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26217..29531)
DNA (3315bp) protein (1105aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9D4_ETHHY
LPXTG-motif cell wall anchor domain-containing protein
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:ADU26125.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L2_022_366G1_scaffold_167_27
unknown

Not on your lists

comp(29611..29739)
DNA (129bp) protein (43aa)

This feature has no annotations

L2_022_366G1_scaffold_167_28
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29745..30443)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY39375.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
lipase
L2_022_366G1_scaffold_167_29
unknown

Not on your lists

comp(30626..31189)
DNA (564bp) protein (188aa)

This feature has no annotations

L2_022_366G1_scaffold_167_30
unknown

Not on your lists

comp(31243..32241)
DNA (999bp) protein (333aa)

This feature has no annotations

Displaying items 1-30 of 50 in total

View Taxonomy