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L2_022_366G1_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_200_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16..1452
DNA (1437bp) protein (479aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Glutamine synthetase n=4 Tax=Bifidobacterium breve RepID=F6C551_BIFBA
Glutamine synthetase
L2_022_366G1_scaffold_200_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1930..3051)
DNA (1122bp) protein (374aa)
Mrp protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYH3_BIFBR
ATP-binding Mrp-like protein
ATP-binding Mrp-like protein {ECO:0000313|EMBL:AHJ20851.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3307..6099)
DNA (2793bp) protein (931aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA ligase n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYH4_BIFBR
NAD-dependent DNA ligase
L2_022_366G1_scaffold_200_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6138..9509)
DNA (3372bp) protein (1124aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AKW8_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20849.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9560..11809
DNA (2250bp) protein (750aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY32_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE95357.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_366G1_scaffold_200_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11942..12112
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C556_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26813.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_200_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12195..12989)
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C557_BIFBA
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF26688.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_200_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12989..14200)
DNA (1212bp) protein (404aa)
Aminotransferase {ECO:0000313|EMBL:ABE95355.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABE95355.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Aminotransferase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY30_BIFBU
Aminotransferase
L2_022_366G1_scaffold_200_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14460..15527
DNA (1068bp) protein (356aa)
NMT1/THI5-like protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNF2_BIFBR
Solute binding protein of ABC transporter system
NMT1/THI5-like protein {ECO:0000313|EMBL:EFE89189.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_022_366G1_scaffold_200_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15595..16371
DNA (777bp) protein (259aa)
ABC transporter, permease protein n=4 Tax=Bifidobacterium breve RepID=F6C560_BIFBA
Permease protein of ABC transporter system
ABC transporter, permease protein {ECO:0000313|EMBL:AEF26347.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_200_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16491..17285)
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Isoprenyl transferase n=5 Tax=Bifidobacterium breve RepID=F9XY27_BIFBU
Undecaprenyl pyrophosphate synthetase
L2_022_366G1_scaffold_200_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17282..18001)
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium breve RepID=F6C562_BIFBA
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_022_366G1_scaffold_200_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18034..19782)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRN8_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20840.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19857..21080)
DNA (1224bp) protein (408aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Bifidobacterium breve RepID=F6C564_BIFBA
L2_022_366G1_scaffold_200_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21077..22267)
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNE6_BIFBR
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_022_366G1_scaffold_200_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22264..23853)
DNA (1590bp) protein (530aa)
DivIVA domain repeat protein n=2 Tax=Bifidobacterium breve RepID=D4BNE5_BIFBR
Hypothetical protein
DivIVA domain repeat protein {ECO:0000313|EMBL:EPD76987.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_200_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24179..24595)
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C567_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28043.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_200_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24687..25697)
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY20_BIFBU
Hypothetical protein containing Lon protease motif
Uncharacterized protein {ECO:0000313|EMBL:ABE95345.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_366G1_scaffold_200_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25778..27508
DNA (1731bp) protein (577aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AKV3_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95344.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_366G1_scaffold_200_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27579..29126)
DNA (1548bp) protein (516aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJK7_BIFBR
DNA-helicase-II-like protein
L2_022_366G1_scaffold_200_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29209..30840
DNA (1632bp) protein (544aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3A422_BIFBR
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ20832.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30946..31170
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BND9_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20831.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31227..32120)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM5_BIFBR
PHP domain containing protein (TRPH)
Uncharacterized protein {ECO:0000313|EMBL:EPD76980.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_200_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32247..32966
DNA (720bp) protein (240aa)
Vitamin K epoxide reductase family n=3 Tax=Bifidobacterium breve RepID=F6C574_BIFBA
putative membrane spanning protein, contains a vitamin K epoxide reductase domain
Uncharacterized protein {ECO:0000313|EMBL:EPD76979.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_200_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33035..33934)
DNA (900bp) protein (300aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Diaminopimelate epimerase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZJK3_BIFBR
Diaminopimelate epimerase
L2_022_366G1_scaffold_200_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34065..34859
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Glutamate racemase n=2 Tax=Bifidobacterium breve RepID=D4BND5_BIFBR
Glutamate racemase
L2_022_366G1_scaffold_200_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34986..35831
DNA (846bp) protein (282aa)
Phospholipase, patatin family n=3 Tax=Bifidobacterium breve RepID=F6C577_BIFBA
Phospholipase
Phospholipase {ECO:0000313|EMBL:AHJ20826.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_200_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35893..36330)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, ATPase
L2_022_366G1_scaffold_200_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36688..37599)
DNA (912bp) protein (304aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Bifidobacterium breve RepID=F6C578_BIFBA
Hypothetical protein, Hypothetical secreted protease
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:AEF26497.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_200_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37759..37926)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BND0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89167.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Cth
Displaying items 1-30 of 39 in total

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