ggKbase home page

L2_022_366G1_scaffold_296

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_296_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07735.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_366G1_scaffold_296_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127..1434)
DNA (1308bp) protein (436aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3J6_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL25808.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_022_366G1_scaffold_296_3
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1533..1928)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6BDB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51352.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_022_366G1_scaffold_296_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1925..3532)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S0D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN61069.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_022_366G1_scaffold_296_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3533..5239)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32211.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
recombinase
L2_022_366G1_scaffold_296_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5255..6889)
DNA (1635bp) protein (545aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71581.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_022_366G1_scaffold_296_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7104..7346)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71582.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_022_366G1_scaffold_296_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7858..8340)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=root RepID=A6NXM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99044.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_022_366G1_scaffold_296_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8549..8791)
DNA (243bp) protein (81aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=A6NXM6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFB77115.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_022_366G1_scaffold_296_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8791..9519)
DNA (729bp) protein (243aa)
Uncharacterized protein n=4 Tax=root RepID=F4XHW4_9FIRM
Domain of unknown function (DUF955).
Uncharacterized protein {ECO:0000313|EMBL:CBK98840.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_366G1_scaffold_296_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9516..9842)
DNA (327bp) protein (109aa)
Uncharacterized protein n=6 Tax=root RepID=C7H8N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71586.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_022_366G1_scaffold_296_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10046..10474
DNA (429bp) protein (143aa)
Predicted transcriptional regulators n=7 Tax=root RepID=D4JXT9_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK98838.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_022_366G1_scaffold_296_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10543..11079
DNA (537bp) protein (179aa)
Uncharacterized protein n=6 Tax=root RepID=H1B4Z1_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EDM99050.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted Zn peptidase
L2_022_366G1_scaffold_296_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11104..11928
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39125.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_022_366G1_scaffold_296_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11962..12267
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R8N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68269.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_022_366G1_scaffold_296_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12267..12953
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45336.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_022_366G1_scaffold_296_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12958..13689
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A6NXN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77107.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_022_366G1_scaffold_296_18
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13682..14161
DNA (480bp) protein (160aa)
Flavodoxin n=1 Tax=Clostridium sp. M62/1 RepID=D4CBT6_9CLOT
Flavodoxin {ECO:0000313|EMBL:EFE12682.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Flavodoxin-like fold.
L2_022_366G1_scaffold_296_19
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14201..14617
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12683.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_022_366G1_scaffold_296_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14666..14875
DNA (210bp) protein (70aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A6NXN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE12684.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_022_366G1_scaffold_296_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14895..15938
DNA (1044bp) protein (348aa)
Macro domain protein n=2 Tax=root RepID=A6NXN8_9FIRM
Macro domain protein {ECO:0000313|EMBL:EDM99058.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L2_022_366G1_scaffold_296_22
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15944..17476
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12686.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L2_022_366G1_scaffold_296_23
Lachnoanaerobaculum sp. OBRC5-5, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17499..19007
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0XG14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ70277.1}; TaxID=936595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. OBRC5-5.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L2_022_366G1_scaffold_296_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19043..19486
DNA (444bp) protein (148aa)
Ribosomal-protein-alanine N-acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBH2_9FIRM
Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:EGJ47700.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Acetyltransferases
L2_022_366G1_scaffold_296_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19523..19945
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2SSD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68258.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_022_366G1_scaffold_296_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20047..20706
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8P7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU95752.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_022_366G1_scaffold_296_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20703..21203
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95753.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_022_366G1_scaffold_296_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21440..21769
DNA (330bp) protein (110aa)
Bacterial mobilisation protein (MobC) n=7 Tax=Firmicutes RepID=D4JXS8_9FIRM
Bacterial mobilisation protein (MobC).
Uncharacterized protein {ECO:0000313|EMBL:EFB77097.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_022_366G1_scaffold_296_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21766..23094
DNA (1329bp) protein (443aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXP6_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDM99066.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Relaxase/Mobilisation nuclease domain.
L2_022_366G1_scaffold_296_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23244..23483
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99067.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted transcriptional regulator
Displaying items 1-30 of 62 in total

View Taxonomy