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L2_022_366G1_scaffold_299

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_299_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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252..896
DNA (645bp) protein (215aa)
Orotate phosphoribosyltransferase (EC:2.4.2.10)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75778.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_366G1_scaffold_299_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

960..1322
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75779.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid carrier protein
L2_022_366G1_scaffold_299_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1440..2696)
DNA (1257bp) protein (419aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI51_9FIRM
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:CDD76998.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
N-acyl-D-glucosamine 2-epimerase
L2_022_366G1_scaffold_299_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2914..3933)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ESB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17777.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_022_366G1_scaffold_299_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4058..4525)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JQB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36171.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L2_022_366G1_scaffold_299_6
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4831..6054)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DCN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87986.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L2_022_366G1_scaffold_299_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6051..6605)
DNA (555bp) protein (185aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUF0_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL24408.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_022_366G1_scaffold_299_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7176..8639
DNA (1464bp) protein (488aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGX0_9FIRM
L2_022_366G1_scaffold_299_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8732..9934)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75782.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted phosphohydrolases
L2_022_366G1_scaffold_299_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10072..10620)
DNA (549bp) protein (183aa)
stage V sporulation protein T n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003056902
Uncharacterized protein {ECO:0000313|EMBL:CDD79780.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, AbrB family
L2_022_366G1_scaffold_299_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10777..14211)
DNA (3435bp) protein (1145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75784.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_022_366G1_scaffold_299_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14352..16421)
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY1_9FIRM
L2_022_366G1_scaffold_299_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16572..17726)
DNA (1155bp) protein (385aa)
Transposase, IS605 OrfB family n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7A0_9FIRM
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDR46608.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
putative transposase
L2_022_366G1_scaffold_299_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17689..18336)
DNA (648bp) protein (216aa)
Resolvase, N-terminal domain protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G7A1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDR46609.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA invertase
L2_022_366G1_scaffold_299_15
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18544..19320)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E7F7A3
Uncharacterized protein {ECO:0000313|EMBL:EET62637.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TraX protein.
L2_022_366G1_scaffold_299_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19325..20179)
DNA (855bp) protein (285aa)
sugar ABC transporter permease n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FE7E4D
ABC transporter, permease protein {ECO:0000313|EMBL:EET62641.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter permease
L2_022_366G1_scaffold_299_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20179..21639)
DNA (1461bp) protein (487aa)
sugar ABC transporter permease n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000317F46D
ABC transporter, permease protein {ECO:0000313|EMBL:EET62642.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_022_366G1_scaffold_299_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21777..23042)
DNA (1266bp) protein (422aa)
ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D4C181
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET62644.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
family 1 extracellular solute-binding protein
L2_022_366G1_scaffold_299_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23442..24476)
DNA (1035bp) protein (345aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQI4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD80504.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L2_022_366G1_scaffold_299_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24528..24713)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75787.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_022_366G1_scaffold_299_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24704..25492)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80501.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPases involved in chromosome partitioning
L2_022_366G1_scaffold_299_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25742..26404
DNA (663bp) protein (221aa)
Hemolysin III family channel protein n=2 Tax=Ruminococcus RepID=C6JGY5_9FIRM
Hemolysin III family channel protein {ECO:0000313|EMBL:EES75789.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
channel protein, hemolysin III family
L2_022_366G1_scaffold_299_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26525..27496)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80499.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like superfamily.
L2_022_366G1_scaffold_299_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27525..27770)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80498.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted endonuclease containing a URI domain
L2_022_366G1_scaffold_299_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28053..29492)
DNA (1440bp) protein (480aa)
sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80497.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_022_366G1_scaffold_299_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29489..31393)
DNA (1905bp) protein (635aa)
PTS system glucose subfamily IIA component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRC9_9FIRM
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDD80496.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PTS system, glucose subfamily, IIA component
L2_022_366G1_scaffold_299_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31814..32806)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80495.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L2_022_366G1_scaffold_299_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33117..34010)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75795.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Membrane proteins related to metalloendopeptidases
L2_022_366G1_scaffold_299_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34072..34905)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80493.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SpoIID/LytB domain
L2_022_366G1_scaffold_299_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35109..35354)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LX89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM99177.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Displaying 30 items

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