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L2_022_366G1_scaffold_361

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_361_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
tRNA-dihydrouridine synthase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDS5_9FIRM
TIM-barrel protein, nifR3 family
L2_022_366G1_scaffold_361_2
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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320..1360
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53786.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
DNA repair ATPase-like protein
L2_022_366G1_scaffold_361_3
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1646..2407
DNA (762bp) protein (254aa)
TonB family C-terminal domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDV8_9FIRM
TonB family C-terminal domain protein {ECO:0000313|EMBL:CCX53785.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
TonB family protein
L2_022_366G1_scaffold_361_4
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2596..3570
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53784.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
AraC family transcriptional regulator
L2_022_366G1_scaffold_361_5
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3825..4439
DNA (615bp) protein (205aa)
Transporter MotA/TolQ/ExbB proton channel family protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEK8_9FIRM
Transporter MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CCX53783.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
MotA/TolQ/ExbB proton channel
L2_022_366G1_scaffold_361_6
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4444..4845
DNA (402bp) protein (134aa)
Transport energizing protein ExbD/TolR family n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLX0_9FIRM
Transport energizing protein ExbD/TolR family {ECO:0000313|EMBL:CCX53782.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
biopolymertransporter ExbD/TolR
L2_022_366G1_scaffold_361_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4944..6614
DNA (1671bp) protein (557aa)
Putative heme utilization radical SAM enzyme HutW n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQN5_9FIRM
Putative heme utilization radical SAM enzyme HutW {ECO:0000313|EMBL:CCX53781.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
radical SAM protein
L2_022_366G1_scaffold_361_8
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6611..7579
DNA (969bp) protein (323aa)
Periplasmic binding protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDV3_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:CCX53780.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
fhuD; putative iron compound ABC transporter iron compound-binding protein
L2_022_366G1_scaffold_361_9
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7566..8660
DNA (1095bp) protein (365aa)
Putative ferrichrome transport system permease protein FhuB n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHS9_9FIRM
Putative ferrichrome transport system permease protein FhuB {ECO:0000313|EMBL:CCX53779.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
ABC-type transporter, integral membrane subunit
L2_022_366G1_scaffold_361_10
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8657..9448
DNA (792bp) protein (264aa)
Iron-chelate-transporting ATPase (EC:3.6.3.34)
Putative ferrichrome ABC transporter ATP-binding protein FhuC n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEK4_9FIRM
Putative ferrichrome ABC transporter ATP-binding protein FhuC {ECO:0000313|EMBL:CCX53778.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L2_022_366G1_scaffold_361_11
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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9579..10094
DNA (516bp) protein (172aa)
Flavodoxin family protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLW5_9FIRM
Flavodoxin family protein {ECO:0000313|EMBL:CCX53777.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
flavodoxin/nitric oxide synthase
L2_022_366G1_scaffold_361_12
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10376..12448
DNA (2073bp) protein (691aa)
TonB-dependent receptor n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQN1_9FIRM
TonB-dependent receptor {ECO:0000313|EMBL:CCX53776.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Outer membrane receptor for ferrienterochelin and colicins
L2_022_366G1_scaffold_361_13
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12705..13655
DNA (951bp) protein (317aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Aspartate carbamoyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDU8_9FIRM
aspartate carbamoyltransferase
L2_022_366G1_scaffold_361_14
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13639..14928
DNA (1290bp) protein (430aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Dihydroorotase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHS4_9FIRM
dihydroorotase
L2_022_366G1_scaffold_361_15
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14925..15995
DNA (1071bp) protein (357aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEJ9_9FIRM
carbamoyl-phosphate synthase small subunit
L2_022_366G1_scaffold_361_16
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16009..19212
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLW1_9FIRM
carbamoyl-phosphate synthase large subunit
L2_022_366G1_scaffold_361_17
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19221..20195
DNA (975bp) protein (325aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQM7_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein
L2_022_366G1_scaffold_361_18
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20188..21228
DNA (1041bp) protein (347aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Dihydroorotate dehydrogenase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDU5_9FIRM
dihydroorotate dehydrogenase
L2_022_366G1_scaffold_361_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21460..22590
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53769.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
AAA domain protein
L2_022_366G1_scaffold_361_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22593..23204
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53768.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L2_022_366G1_scaffold_361_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23333..23785
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53767.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
HutP family protein
L2_022_366G1_scaffold_361_22
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23850..24608
DNA (759bp) protein (253aa)
Beta-1 4-glucosyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BQM3_9FIRM
Beta-1 4-glucosyltransferase {ECO:0000313|EMBL:CCX53766.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
beta-1
L2_022_366G1_scaffold_361_23
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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24611..25543
DNA (933bp) protein (311aa)
Glycosyl transferase family 8 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDU2_9FIRM
Glycosyl transferase family 8 {ECO:0000313|EMBL:CCX53765.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
general stress protein A
L2_022_366G1_scaffold_361_24
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25548..26561
DNA (1014bp) protein (338aa)
Lipopolysaccharide 1 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHR6_9FIRM
Lipopolysaccharide 1 {ECO:0000313|EMBL:CCX53764.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
lipopolysaccharide 1
L2_022_366G1_scaffold_361_25
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26644..27810
DNA (1167bp) protein (389aa)
Nucleotide sugar dehydrogenase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEJ0_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CCX53763.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
nucleotide sugar dehydrogenase
L2_022_366G1_scaffold_361_26
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27864..28904
DNA (1041bp) protein (347aa)
Putative NAD-dependent epimerase/dehydratase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLV0_9FIRM
Putative NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCX53762.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
putative NAD-dependent epimerase/dehydratase
L2_022_366G1_scaffold_361_27
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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29212..29733
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=2 Tax=Veillonella RepID=K9DKN7_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
translation initiation factor IF-3
L2_022_366G1_scaffold_361_28
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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29752..29949
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Veillonella RepID=K9D817_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L35
L2_022_366G1_scaffold_361_29
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


29985..30335
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BHR1_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
50S ribosomal protein L20
Displaying 29 items

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