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L2_022_366G1_scaffold_377

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_377_1
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..500)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WX29_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95162.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_022_366G1_scaffold_377_2
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(580..1773)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IKW6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM45399.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L2_022_366G1_scaffold_377_3
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1791..2315)
DNA (525bp) protein (175aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Tannerella sp. CAG:118 RepID=R5IKB2_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCY37382.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
RNA polymerase
L2_022_366G1_scaffold_377_4
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2485..3729)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5I5L0_9PORP
SpoOJ/ParA/ParB/repB family protein
SpoOJ/ParA/ParB/repB family protein {ECO:0000313|EMBL:AHF11577.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L2_022_366G1_scaffold_377_5
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3749..5023)
DNA (1275bp) protein (425aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Bacteroidales RepID=K0X7Z8_9PORP
L2_022_366G1_scaffold_377_6
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5060..5536)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBF5_9PORP
Iron transporter {ECO:0000313|EMBL:KHM47309.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
iron transporter
L2_022_366G1_scaffold_377_7
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5807..6484)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CJU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM88412.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
peptidase
L2_022_366G1_scaffold_377_8
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6599..8641)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WZU8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63831.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
dihydrofolate reductase
L2_022_366G1_scaffold_377_9
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8671..9855)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5ICU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38134.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
SAM-dependent methyltransferase
L2_022_366G1_scaffold_377_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9874..11199)
DNA (1326bp) protein (442aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
RIP metalloprotease RseP n=2 Tax=Bacteroidales RepID=K0X7Z5_9PORP
zinc metalloprotease
L2_022_366G1_scaffold_377_11
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11221..12378)
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F331_9BACE
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_022_366G1_scaffold_377_12
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12476..13339)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IMG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38137.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
L2_022_366G1_scaffold_377_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13677..14870
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV10_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX95174.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_022_366G1_scaffold_377_14
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(14967..16184)
DNA (1218bp) protein (406aa)
Peptidase S51 dipeptidase E id=1773397 bin=GWE2_Bacteroidetes_40_15 species=Nonlabens dokdonensis genus=Nonlabens taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
peptidase S51, dipeptidase E
Tax=BJP_08E140C01_Bacteroidetes_41_49
L2_022_366G1_scaffold_377_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16235..17581)
DNA (1347bp) protein (449aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETK6_9BACE
dihydrolipoyl dehydrogenase
L2_022_366G1_scaffold_377_16
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17653..19119)
DNA (1467bp) protein (489aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EX47_9BACE
L2_022_366G1_scaffold_377_17
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19123..20463)
DNA (1341bp) protein (447aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X0Z7_9PORP
L2_022_366G1_scaffold_377_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20480..20857)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F6P8_9BACE
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_022_366G1_scaffold_377_19
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20899..21993)
DNA (1095bp) protein (365aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Aminomethyltransferase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F554_9BACE
glycine cleavage system protein T
L2_022_366G1_scaffold_377_20
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22008..22997)
DNA (990bp) protein (330aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X906_9PORP
lipoyltransferase
L2_022_366G1_scaffold_377_21
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23259..24332)
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
3-isopropylmalate dehydrogenase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YML5_9PORP
3-isopropylmalate dehydrogenase
L2_022_366G1_scaffold_377_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24357..25901)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1H5Y8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA91073.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
2-isopropylmalate synthase LeuA
L2_022_366G1_scaffold_377_23
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25880..26470)
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S7S8_9PORP
3-isopropylmalate dehydratase small subunit
L2_022_366G1_scaffold_377_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26505..27902)
DNA (1398bp) protein (466aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Bacteroides sp. D20 RepID=D2ES81_9BACE
L2_022_366G1_scaffold_377_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27950..29443)
DNA (1494bp) protein (498aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
2-isopropylmalate synthase n=13 Tax=Bacteroides RepID=A6L1V7_BACV8
2-isopropylmalate synthase
Displaying 25 items

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