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L2_022_366G1_scaffold_406

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_406_1
unknown

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2..199
DNA (198bp) protein (66aa)

This feature has no annotations

L2_022_366G1_scaffold_406_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(270..1868)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XFZ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95813.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_022_366G1_scaffold_406_3
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1949..3106)
DNA (1158bp) protein (386aa)
Major facilitator transporter n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CK97_9PORP
Major facilitator transporter {ECO:0000313|EMBL:ERM89386.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
major facilitator transporter
L2_022_366G1_scaffold_406_4
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3121..3936)
DNA (816bp) protein (272aa)
3-deoxy-8-phosphooctulonate synthase n=2 Tax=Porphyromonadaceae RepID=R7DF39_9PORP
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:ERM89387.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
2-dehydro-3-deoxyphosphogluconate aldolase
L2_022_366G1_scaffold_406_5
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3942..4649)
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y993_9BACE
16S rRNA methyltransferase
L2_022_366G1_scaffold_406_6
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4662..6092)
DNA (1431bp) protein (477aa)
NupC family nucleoside transporter n=1 Tax=Tannerella sp. CAG:51 RepID=R7DFV6_9PORP
NupC family nucleoside transporter {ECO:0000313|EMBL:EHL81650.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
Na+ dependent nucleoside transporter domain-containing protein
L2_022_366G1_scaffold_406_7
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6121..7353)
DNA (1233bp) protein (411aa)
Nucleoside transporter n=1 Tax=Tannerella sp. CAG:118 RepID=R5IEK1_9PORP
Nucleoside permease {ECO:0000313|EMBL:KHM44144.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
xanthosine permease
L2_022_366G1_scaffold_406_8
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7449..8012)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S7Q7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM44143.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L2_022_366G1_scaffold_406_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8139..9203)
DNA (1065bp) protein (355aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ETC9_9BACE
L2_022_366G1_scaffold_406_10
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9344..9811)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WX48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62851.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
DoxX family protein
L2_022_366G1_scaffold_406_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10013..10906)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WU81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ62852.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_022_366G1_scaffold_406_12
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11085..11750)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ENK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94290.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
sialate O-acetylesterase
L2_022_366G1_scaffold_406_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11757..12581)
DNA (825bp) protein (275aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESE8_9BACE
sugar isomerase (SIS)
L2_022_366G1_scaffold_406_14
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12592..13428)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X3X1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX94288.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ATPase
L2_022_366G1_scaffold_406_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13425..14600)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F0F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94287.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
putative transmembrane protein
L2_022_366G1_scaffold_406_16
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14597..17395)
DNA (2799bp) protein (933aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F1Z0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94286.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
4Fe-4S ferredoxin
L2_022_366G1_scaffold_406_17
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17431..18657)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ENK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94285.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_022_366G1_scaffold_406_18
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18681..20579)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6LAS3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB71377.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
MFS transporter
L2_022_366G1_scaffold_406_19
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20591..21904)
DNA (1314bp) protein (438aa)
SpoIID/LytB domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYB2_9BACE
Amidase enhancer {ECO:0000313|EMBL:GAK35054.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
L2_022_366G1_scaffold_406_20
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21901..22845)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0J1U4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59859.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
putative glycosyltransferase
L2_022_366G1_scaffold_406_21
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22850..24313)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=2 Tax=Bacteroides salyersiae RepID=I9TEM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY67636.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
putative glycosyltransferase
L2_022_366G1_scaffold_406_22
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24340..27348)
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X0X1_9PORP
Xanthan lyase {ECO:0000313|EMBL:GAK35050.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
metallophosphoesterase
Displaying 22 items

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