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L2_022_366G1_scaffold_420

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_420_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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86..964
DNA (879bp) protein (293aa)
TIGR00255 family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARU4_9CLOT
TIGR00255 family protein {ECO:0000313|EMBL:ERI68559.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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980..1240
DNA (261bp) protein (87aa)
UPF0296 protein HMPREF1548_03994 n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9P4_9CLOT
UPF0296 protein HMPREF1548_03994 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_3
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1230..1862
DNA (633bp) protein (211aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH28_9CLOT
L2_022_366G1_scaffold_420_4
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1865..2110
DNA (246bp) protein (82aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMJ6_9CLOT
L2_022_366G1_scaffold_420_5
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2223..3506
DNA (1284bp) protein (428aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8M6_9CLOT
L2_022_366G1_scaffold_420_6
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3490..4023
DNA (534bp) protein (178aa)
pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase PgsA (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ART9_9CLOT
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ERI68554.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_366G1_scaffold_420_7
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4040..5317
DNA (1278bp) protein (426aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9N9_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
competence/damage-inducible protein cinA
L2_022_366G1_scaffold_420_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5398..6864
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68552.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_366G1_scaffold_420_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7380..8513
DNA (1134bp) protein (378aa)
Protein RecA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ART3_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
protein RecA
L2_022_366G1_scaffold_420_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8510..9148
DNA (639bp) protein (213aa)
Regulatory protein RecX n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH18_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
recX; recombination regulator RecX
L2_022_366G1_scaffold_420_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9328..10875
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Ribonuclease Y n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMI5_9CLOT
metal dependent phosphohydrolase
L2_022_366G1_scaffold_420_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10942..11484
DNA (543bp) protein (181aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes (EC:3.6.1.13)
Hydrolase, NUDIX family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8L6_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERI68545.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_366G1_scaffold_420_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11702..12301
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68544.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_14
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12488..13372
DNA (885bp) protein (295aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9N0_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
tyrosine recombinase XerD subunit
L2_022_366G1_scaffold_420_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13713..15200
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CH13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68542.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15212..15898
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68541.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16147..16548
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68539.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L2_022_366G1_scaffold_420_18
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16615..17643)
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9M4_9CLOT
L2_022_366G1_scaffold_420_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17968..19347)
DNA (1380bp) protein (460aa)
Putative stage V sporulation protein B n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMH5_9CLOT
Putative stage V sporulation protein B {ECO:0000313|EMBL:ERI68536.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
polysaccharide biosynthesis protein
L2_022_366G1_scaffold_420_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19558..20739
DNA (1182bp) protein (394aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8K6_9CLOT
L2_022_366G1_scaffold_420_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20773..21216
DNA (444bp) protein (148aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARR7_9CLOT
Fe-S iron-sulfur cluster assembly protein, NifU family {ECO:0000313|EMBL:ERI68534.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L2_022_366G1_scaffold_420_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21220..22296
DNA (1077bp) protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9L7_9CLOT
L2_022_366G1_scaffold_420_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22589..23743
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CMG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68531.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23874..24404
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B8K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68530.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_022_366G1_scaffold_420_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24547..25365)
DNA (819bp) protein (273aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ARR1_9CLOT
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:ERI68529.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Displaying 25 items

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