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L2_022_366G1_scaffold_422

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_422_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..698)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90180.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_022_366G1_scaffold_422_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(738..1481)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90179.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
dTDP-glucose pyrophosphorylase
L2_022_366G1_scaffold_422_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1611..2843)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22082.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
glycosyltransferase
L2_022_366G1_scaffold_422_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2843..3955)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C5R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22081.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
glycosyltransferase
L2_022_366G1_scaffold_422_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3968..5041)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22080.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_022_366G1_scaffold_422_6
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5059..5616)
DNA (558bp) protein (186aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
Serine acetyltransferase n=1 Tax=Olsenella profusa F0195 RepID=U2TIP0_9ACTN
serine O-acetyltransferase
L2_022_366G1_scaffold_422_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5639..6646)
DNA (1008bp) protein (336aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TI02_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ58621.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycosyl transferase
L2_022_366G1_scaffold_422_8
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6700..7914)
DNA (1215bp) protein (405aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JJP9_9PORP
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDE64120.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
coenzyme F420-reducing hydrogenase
L2_022_366G1_scaffold_422_9
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7952..9085)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JKA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE64121.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
polysaccharide pyruvyl transferase
L2_022_366G1_scaffold_422_10
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9082..10221)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90172.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
capsule biosynthesis protein CapM
L2_022_366G1_scaffold_422_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10222..10830)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q2N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24991.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein
L2_022_366G1_scaffold_422_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10823..11425)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QST5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24992.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
UDP-galactose phosphate transferase
L2_022_366G1_scaffold_422_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11471..14473)
DNA (3003bp) protein (1001aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24994.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
polysaccharide biosynthesis protein
L2_022_366G1_scaffold_422_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14738..15055)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QSV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24997.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_422_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15079..15525)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82050.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_422_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15868..16884)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEA82051.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEA82051.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPI7_9CLOT
L2_022_366G1_scaffold_422_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17001..18116)
DNA (1116bp) protein (372aa)
Phosphotransferase enzyme family n=2 Tax=Clostridium RepID=B6FPI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25016.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphotransferase enzyme family.
L2_022_366G1_scaffold_422_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..19042)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PL02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25018.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
dTDP-glucose pyrophosphorylase
L2_022_366G1_scaffold_422_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19221..20075
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B6FPJ0_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEA82054.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
AraC family transcriptional regulator
L2_022_366G1_scaffold_422_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20280..21146)
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FPJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25024.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_022_366G1_scaffold_422_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21164..22054)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FPJ3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82057.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter
L2_022_366G1_scaffold_422_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22146..23510)
DNA (1365bp) protein (455aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=2 Tax=Clostridium RepID=B6FPJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25028.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type sugar transport system, periplasmic component
L2_022_366G1_scaffold_422_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23735..25189
DNA (1455bp) protein (485aa)
Arylsulfatase n=2 Tax=Clostridium RepID=B6FPJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25029.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
sulfatase
L2_022_366G1_scaffold_422_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25284..25544)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PL17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC25038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
methylenetetrahydrofolate dehydrogenase
Displaying 24 items

View Taxonomy