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L2_022_366G1_scaffold_436

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_436_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..163
DNA (162bp) protein (54aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV6_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_366G1_scaffold_436_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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200..2488
DNA (2289bp) protein (763aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV6_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84035.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Peptidoglycan-binding domain 1 protein
L2_022_366G1_scaffold_436_3
unknown

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2512..2673
DNA (162bp) protein (54aa)

This feature has no annotations

L2_022_366G1_scaffold_436_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2775..9230
DNA (6456bp) protein (2152aa)
F5/8 type C domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FIV4_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEA84066.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
sialidase-like protein
L2_022_366G1_scaffold_436_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9376..9576)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=2 Tax=Clostridium RepID=B6FIV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22387.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cspD1; cold-shock protein D1
L2_022_366G1_scaffold_436_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9742..10170
DNA (429bp) protein (143aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FIV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22386.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Iron-sulfur cluster regulator IscR
L2_022_366G1_scaffold_436_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10227..10661
DNA (435bp) protein (145aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=B6FIV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22385.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
BadM/Rrf2 family transcriptional regulator
L2_022_366G1_scaffold_436_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10676..11608
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Clostridium RepID=B6FIV0_9CLOT
L2_022_366G1_scaffold_436_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11784..12536
DNA (753bp) protein (251aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridium RepID=B6FIU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22383.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_436_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12533..13453
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK92_9CLOT
L2_022_366G1_scaffold_436_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13466..13684
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PV48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22381.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_436_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13681..15390
DNA (1710bp) protein (570aa)
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22380.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_436_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15457..15714
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=2 Tax=Clostridium RepID=B6FIU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22379.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphotransferase system, phosphocarrier protein HPr
L2_022_366G1_scaffold_436_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15743..17365
DNA (1623bp) protein (541aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDI0_9CLOT
L2_022_366G1_scaffold_436_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17525..18916
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QK86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22377.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Permeases
L2_022_366G1_scaffold_436_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19015..19932
DNA (918bp) protein (306aa)
Hydrolase, alpha/beta domain protein n=2 Tax=Clostridium RepID=B6FIU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22376.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
alpha/beta hydrolase
L2_022_366G1_scaffold_436_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19936..21741
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22375.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Alcohol acetyltransferase.
L2_022_366G1_scaffold_436_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21761..22411
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PND7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22374.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_436_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22480..23523)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PDH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22373.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_022_366G1_scaffold_436_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23607..23807)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FIT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA84050.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_436_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23898..24635
DNA (738bp) protein (246aa)
PHP domain protein n=2 Tax=Clostridium RepID=B6FIT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22371.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Histidinol phosphatase and related hydrolases of the PHP family
Displaying 21 items

View Taxonomy