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L2_022_366G1_scaffold_437

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_437_1
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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363..905
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 PF3_9FIRM">RepID=R5BPF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53356.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L2_022_366G1_scaffold_437_2
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1013..1993
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53357.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L2_022_366G1_scaffold_437_3
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2135..2761
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53358.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L2_022_366G1_scaffold_437_4
unknown

Not on your lists

2838..3008
DNA (171bp) protein (57aa)

This feature has no annotations

L2_022_366G1_scaffold_437_5
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3083..4432
DNA (1350bp) protein (450aa)
Amino acid permease n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGG2_9FIRM
Amino acid permease {ECO:0000313|EMBL:CCX53359.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
D-serine/D-alanine/glycine:proton symporter, AAT family
L2_022_366G1_scaffold_437_6
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4610..4885)
DNA (276bp) protein (92aa)
Putative thioredoxin n=1 Tax=Veillonella sp. CAG:933 RepID=R5BCM3_9FIRM
Putative thioredoxin {ECO:0000313|EMBL:CCX53360.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L2_022_366G1_scaffold_437_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5094..5984)
DNA (891bp) protein (297aa)
Transcriptional regulator LysR family n=1 Tax=Veillonella sp. CAG:933 PF9_9FIRM">RepID=R5BPF9_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCX53361.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
LysR family transcriptional regulator
L2_022_366G1_scaffold_437_8
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6122..6754)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53362.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L2_022_366G1_scaffold_437_9
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7067..7336
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53363.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L2_022_366G1_scaffold_437_10
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7455..9623
DNA (2169bp) protein (723aa)
Copper-exporting ATPase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGG5_9FIRM
Copper-exporting ATPase {ECO:0000313|EMBL:CCX53364.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
copper-translocating P-type ATPase
L2_022_366G1_scaffold_437_11
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10191..10541
DNA (351bp) protein (117aa)
UPF0122 protein BN814_00961 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BCM9_9FIRM
UPF0122 protein BN814_00961 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
helix-turn-helix protein YlxM/p13 family protein
L2_022_366G1_scaffold_437_12
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


10543..11901
DNA (1359bp) protein (453aa)
Signal recognition particle protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BPG5_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
signal recognition particle protein
L2_022_366G1_scaffold_437_13
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11938..12201
DNA (264bp) protein (88aa)
30S ribosomal protein S16 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKP0_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
30S ribosomal protein S16
L2_022_366G1_scaffold_437_14
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12223..12450
DNA (228bp) protein (76aa)
UPF0109 protein HMPREF9282_01568 n=2 Tax=Veillonella RepID=K9DKU0_9FIRM
UPF0109 protein HMPREF9282_01568 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
RNA-binding protein
L2_022_366G1_scaffold_437_15
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12464..12871
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX53369.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L2_022_366G1_scaffold_437_16
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12871..13368
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Veillonella sp. CAG:933 RepID=R5BCN3_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
16S rRNA processing protein RimM
L2_022_366G1_scaffold_437_17
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13426..14220
DNA (795bp) protein (265aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BPH1_9FIRM
tRNA (guanine-N1)-methyltransferase
L2_022_366G1_scaffold_437_18
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14365..15090
DNA (726bp) protein (242aa)
Peptidase C26 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKP5_9FIRM
Peptidase C26 {ECO:0000313|EMBL:CCX53372.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
peptidase C26
L2_022_366G1_scaffold_437_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15255..15755
DNA (501bp) protein (167aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDF9_9FIRM
crossover junction endodeoxyribonuclease RuvC
L2_022_366G1_scaffold_437_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15778..16386
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGH5_9FIRM
Holliday junction DNA helicase RuvA
L2_022_366G1_scaffold_437_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16389..17438
DNA (1050bp) protein (350aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Veillonella sp. CAG:933 RepID=R5BCN8_9FIRM
Holliday junction DNA helicase RuvB
L2_022_366G1_scaffold_437_22
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17441..18958
DNA (1518bp) protein (506aa)
Stage II sporulation protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BPH8_9FIRM
Stage II sporulation protein {ECO:0000313|EMBL:CCX53376.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
SpoIID/LytB domain-containing protein
L2_022_366G1_scaffold_437_23
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19059..20081
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D0D1_9FIRM
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L2_022_366G1_scaffold_437_24
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20209..21318
DNA (1110bp) protein (370aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BDG3_9FIRM
queuine tRNA-ribosyltransferase
L2_022_366G1_scaffold_437_25
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21370..21651
DNA (282bp) protein (94aa)
Preprotein translocase YajC subunit n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGI0_9FIRM
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CCX53379.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
preprotein translocase subunit YajC
L2_022_366G1_scaffold_437_26
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21668..22216
DNA (549bp) protein (183aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BCP6_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L2_022_366G1_scaffold_437_27
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22318..23574
DNA (1257bp) protein (419aa)
Protein translocase subunit SecD n=1 Tax=Veillonella sp. CAG:933 RepID=R5BPI3_9FIRM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
protein-export membrane protein SecD
L2_022_366G1_scaffold_437_28
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23574..24476
DNA (903bp) protein (301aa)
Protein-export membrane protein SecF n=1 Tax=Veillonella sp. CAG:933 RepID=R5BKQ6_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
protein-export membrane protein SecF
Displaying 28 items

View Taxonomy