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L2_022_366G1_scaffold_449

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_449_1
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..418
DNA (417bp) protein (139aa)
MerR family transcriptional regulator n=1 Tax=Clostridium tetani 12124569 RepID=U6EX51_CLOTA
merR; MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:CDI49014.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L2_022_366G1_scaffold_449_2
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

802..1548
DNA (747bp) protein (249aa)
7-alpha-hydroxysteroid dehydrogenase (EC:1.1.1.159)
Bile acid 7-dehydroxylase 1/3 n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IUM8_9FIRM
Bile acid 7-dehydroxylase 1/3 {ECO:0000313|EMBL:CCY45988.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_022_366G1_scaffold_449_3
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

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comp(1563..2771)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HJ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE39028.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
hypothetical protein
L2_022_366G1_scaffold_449_4
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2894..3127
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6CU03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA80193.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
hypothetical protein
L2_022_366G1_scaffold_449_5
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3117..3437
DNA (321bp) protein (107aa)
Coat F domain protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6D585_9CLOT
Coat F domain protein {ECO:0000313|EMBL:CDA80194.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
Coat F domain-containing protein
L2_022_366G1_scaffold_449_6
unknown

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3712..4119
DNA (408bp) protein (136aa)

This feature has no annotations

L2_022_366G1_scaffold_449_7
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

4132..4356
DNA (225bp) protein (75aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5J246_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY46674.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L2_022_366G1_scaffold_449_8
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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4340..4981
DNA (642bp) protein (214aa)
UPF0736 protein HMPREF1015_01589 n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HHN3_9MOLU
UPF0736 protein HMPREF1015_01589 {ECO:0000313|EMBL:CCY27619.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
L2_022_366G1_scaffold_449_9
Mycoplasma sp. CAG:877, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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5262..6647
DNA (1386bp) protein (462aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262907 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:877.;"
asnS; Asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5M0V1_9MOLU
L2_022_366G1_scaffold_449_10
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

6721..6978
DNA (258bp) protein (86aa)
Putative lipoprotein n=1 Tax=Clostridium sp. CAG:762 RepID=R5SWA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY28545.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
L2_022_366G1_scaffold_449_11
Mycoplasma sp. CAG:611, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

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7002..7232
DNA (231bp) protein (77aa)
Probable lipoprotein n=1 Tax=Mycoplasma sp. CAG:611 RepID=R5YEV8_9MOLU
Probable lipoprotein {ECO:0000313|EMBL:CDA23309.1}; TaxID=1262905 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:611.;"
L2_022_366G1_scaffold_449_12
Clostridium sp. CAG:524, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7311..7970
DNA (660bp) protein (220aa)
Uncharacterized protein family (UPF0153) n=1 Tax=Clostridium sp. CAG:524 RepID=R6BHV5_9CLOT
Uncharacterized protein family (UPF0153) {ECO:0000313|EMBL:CDA60369.1}; TaxID=1262817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:524.;"
L2_022_366G1_scaffold_449_13
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

8043..9116
DNA (1074bp) protein (358aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IUU1_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCY45865.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
D-alanyl-D-alanine carboxypeptidase
L2_022_366G1_scaffold_449_14
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

9110..9688
DNA (579bp) protein (193aa)
Spore maturation protein A n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HH56_9MOLU
Spore maturation protein A {ECO:0000313|EMBL:CCY28903.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
nucleoside recognition domain-containing protein
L2_022_366G1_scaffold_449_15
Acholeplasma sp. CAG:878, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

9685..10209
DNA (525bp) protein (175aa)
Spore maturation protein B n=1 Tax=Acholeplasma sp. CAG:878 RepID=R5HVV7_9MOLU
Spore maturation protein B {ECO:0000313|EMBL:CCY28902.1}; TaxID=1262686 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma; environmental samples.;" source="Acholeplasma sp. CAG:878.;"
nucleoside recognition domain-containing protein
L2_022_366G1_scaffold_449_16
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

10267..11016
DNA (750bp) protein (250aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MV95_9FIRM
ribosomal large subunit pseudouridine synthase B
L2_022_366G1_scaffold_449_17
Mycoplasma sp. CAG:877, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(11024..11746)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:877 RepID=R5M3P5_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CCY79901.1}; TaxID=1262907 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:877.;"
L2_022_366G1_scaffold_449_18
Clostridium sp. CAG:1000, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11809..12054)
DNA (246bp) protein (82aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. CAG:1000 RepID=R5A423_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCX35717.1}; TaxID=1262768 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1000.;"
4Fe-4S ferredoxin
L2_022_366G1_scaffold_449_19
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

12124..12873
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JAS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46091.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_022_366G1_scaffold_449_20
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(12885..13994)
DNA (1110bp) protein (370aa)
Spore germination protein amino acid permease n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IVL9_9FIRM
Spore germination protein amino acid permease {ECO:0000313|EMBL:CCY46090.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
spore gernimation protein
L2_022_366G1_scaffold_449_21
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(13978..15183)
DNA (1206bp) protein (402aa)
Germination protein Ger(X)C family n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5J0F7_9FIRM
Germination protein Ger(X)C family {ECO:0000313|EMBL:CCY46089.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
spore gernimation protein GerC
L2_022_366G1_scaffold_449_22
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(15167..16651)
DNA (1485bp) protein (495aa)
GerA spore germination protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IUZ2_9FIRM
GerA spore germination protein {ECO:0000313|EMBL:CCY46088.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
spore germination protein KA
L2_022_366G1_scaffold_449_23
unknown

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16751..17188
DNA (438bp) protein (146aa)

This feature has no annotations

L2_022_366G1_scaffold_449_24
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

17227..18447
DNA (1221bp) protein (407aa)
RNA methyltransferase TrmA family n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5NB21_9FIRM
RNA methyltransferase TrmA family {ECO:0000313|EMBL:CCY94407.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
yefA; RNA methyltransferase
L2_022_366G1_scaffold_449_25
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18461..18814
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7BB91_9CLOT
ArsC family transcriptional regulator {ECO:0000313|EMBL:KJU71479.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ArsC family protein
L2_022_366G1_scaffold_449_26
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18793..19665
DNA (873bp) protein (291aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:433 RepID=R6Y1V1_9CLOT
RNA pseudouridylate synthase
L2_022_366G1_scaffold_449_27
unknown

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19763..19978
DNA (216bp) protein (72aa)

This feature has no annotations

L2_022_366G1_scaffold_449_28
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

20094..22394
DNA (2301bp) protein (767aa)
ATPases with chaperone activity ATP-binding subunit n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IVZ3_9FIRM
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CCY46245.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
ClpA; chaperone ATPase
L2_022_366G1_scaffold_449_29
unknown

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22450..23016
DNA (567bp) protein (189aa)

This feature has no annotations

L2_022_366G1_scaffold_449_30
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23166..23948
DNA (783bp) protein (261aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262837 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:762.;"
gltX; glutamate--tRNA ligase GltX (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:762 RepID=R5TD27_9CLOT
Displaying 30 items

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