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L2_022_366G1_scaffold_479

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_479_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..116)
DNA (114bp) protein (38aa)
30S ribosomal protein S1 n=6 Tax=Bifidobacterium breve RepID=F6CA43_BIFBA
rpsA; SSU ribosomal protein S1P
SSU ribosomal protein S1P {ECO:0000313|EMBL:AHJ20935.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_479_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(366..1244)
DNA (879bp) protein (293aa)
Bifunctional protein FolD n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZX22_BIFBR
Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_479_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1349..2521
DNA (1173bp) protein (391aa)
Solute-binding protein of ABC transporter system for metals n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYI6_BIFBU
Solute-binding protein of ABC transporter system for metals
Solute-binding protein of ABC transporter system for metals {ECO:0000313|EMBL:ABE95437.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_022_366G1_scaffold_479_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2679..3551
DNA (873bp) protein (291aa)
ATP-binding protein of ABC transporter system for metals n=6 Tax=Bifidobacterium breve RepID=F9XYI5_BIFBU
ATP-binding protein of ABC transporter system for metals
Uncharacterized protein {ECO:0000313|EMBL:EPD74630.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_479_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3642..4475
DNA (834bp) protein (278aa)
ABC 3 transport family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E5F5_BIFBR
Permease protein of ABC transporter system for metals
Permease protein of ABC transporter system for metals {ECO:0000313|EMBL:AHJ19016.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_022_366G1_scaffold_479_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4549..5064)
DNA (516bp) protein (172aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Bifidobacterium breve RepID=F6CA48_BIFBA
L2_022_366G1_scaffold_479_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5061..5654)
DNA (594bp) protein (198aa)
CarD-like protein n=6 Tax=Bifidobacterium breve RepID=F6CA49_BIFBA
CarD-like transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:AEF27623.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_479_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5832..8084
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Bifidobacterium breve RepID=D4BNP7_BIFBR
1,4-alpha-glucan branching enzyme
L2_022_366G1_scaffold_479_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8115..8837
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium breve RepID=D4BNP6_BIFBR
Two-component response regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD74625.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_479_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8837..9910
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bifidobacterium breve RepID=F6CA52_BIFBA
Sensory transduction protein kinase
L2_022_366G1_scaffold_479_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9968..10678)
DNA (711bp) protein (237aa)
Phosphoribosyl transferase domain protein n=2 Tax=Bifidobacterium breve RepID=F6CA53_BIFBA
phosphoribosyl transferase domain protein
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:AEF27180.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_479_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10714..11517)
DNA (804bp) protein (268aa)
HAD hydrolase, family IIB n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUA3_BIFBR
HAD hydrolase, family IIB {ECO:0000313|EMBL:ERI87643.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphomannomutase
L2_022_366G1_scaffold_479_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11630..12031
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6CA55_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27743.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_022_366G1_scaffold_479_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12053..13594)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNP1_BIFBR
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ20922.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_479_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13591..16683)
DNA (3093bp) protein (1031aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BNP0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89277.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
putative membrane spanning protein
L2_022_366G1_scaffold_479_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16729..17028)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB n=6 Tax=Bifidobacterium breve RepID=F6CA58_BIFBA
Transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_022_366G1_scaffold_479_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17289..18623
DNA (1335bp) protein (445aa)
Cell envelope-like function transcriptional attenuator common domain protein n=3 Tax=Bifidobacterium breve RepID=F6CA60_BIFBA
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHJ20919.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_022_366G1_scaffold_479_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18793..20619
DNA (1827bp) protein (609aa)
DNA segregation ATPase n=11 Tax=Bifidobacterium RepID=B3DSU0_BIFLD
Cell division protein FtsK {ECO:0000313|EMBL:KEY21896.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L2_022_366G1_scaffold_479_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20733..21011
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB1 n=23 Tax=Bifidobacterium RepID=WHIB1_BIFLO
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_022_366G1_scaffold_479_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21084..22571)
DNA (1488bp) protein (496aa)
Histidine kinase-like protein n=17 Tax=Bifidobacterium RepID=Q8G5J8_BIFLO
two-component sensor kinase
Histidine kinase {ECO:0000313|EMBL:KHD96073.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Displaying 20 items

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