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L2_022_366G1_scaffold_529

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_529_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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170..2356
DNA (2187bp) protein (729aa)
Export membrane protein SecD n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B765_RUMGN
Export membrane protein SecD {ECO:0000313|EMBL:EDN76327.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
SecD/SecF family protein-export membrane protein
L2_022_366G1_scaffold_529_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2353..3657
DNA (1305bp) protein (435aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Potassium uptake protein, TrkH family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ8_9CLOT
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EEA80845.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_366G1_scaffold_529_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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3744..4340
DNA (597bp) protein (199aa)
TrkA N-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ7_9CLOT
TrkA N-terminal domain protein {ECO:0000313|EMBL:EEA80844.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TrkA-N domain-containing protein
L2_022_366G1_scaffold_529_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4359..5414
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23976.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphate/sulphate permeases
L2_022_366G1_scaffold_529_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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5431..6054
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80842.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phosphate transport regulator (distant homolog of PhoU)
L2_022_366G1_scaffold_529_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6135..7898
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80841.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Nucleoside-diphosphate-sugar epimerases
L2_022_366G1_scaffold_529_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7898..8296
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23985.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_529_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8323..8589
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80839.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_529_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8709..9107
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23988.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_529_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9104..9250
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23991.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_529_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9219..9590
DNA (372bp) protein (124aa)
undecaprenol kinase (EC:2.7.1.66 2.7.1.107)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23992.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_529_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9626..9967
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80836.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_529_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9990..11573
DNA (1584bp) protein (528aa)
ABC1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSY8_9CLOT
ABC1 family protein {ECO:0000313|EMBL:EEA80835.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted unusual protein kinase
L2_022_366G1_scaffold_529_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11699..12604
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QQ19_9CLOT
nadA; Quinolinate synthetase A
L2_022_366G1_scaffold_529_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12630..13790
DNA (1161bp) protein (387aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=2 Tax=Clostridium RepID=B6FSY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24004.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_529_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13807..14658
DNA (852bp) protein (284aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EEA80832.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EEA80832.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Clostridium RepID=B6FSY5_9CLOT
L2_022_366G1_scaffold_529_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14695..15207
DNA (513bp) protein (171aa)
HTH domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSY4_9CLOT
HTH domain protein {ECO:0000313|EMBL:EEA80831.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator
L2_022_366G1_scaffold_529_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15240..16076)
DNA (837bp) protein (279aa)
Multidrug-efflux transporter 2 regulator n=3 Tax=Clostridium RepID=B6FSY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24009.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
MerR family transcriptional regulator
L2_022_366G1_scaffold_529_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16175..17503
DNA (1329bp) protein (443aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=B6FSY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24010.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L2_022_366G1_scaffold_529_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17530..17979)
DNA (450bp) protein (150aa)
YqeY-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSX9_9CLOT
YqeY-like protein {ECO:0000313|EMBL:EEA80871.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_529_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18231..19262
DNA (1032bp) protein (344aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24013.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC transporter permease subunit
L2_022_366G1_scaffold_529_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19259..20239
DNA (981bp) protein (327aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX7_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEA80869.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type enterochelin transport system, permease component
L2_022_366G1_scaffold_529_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20243..20968
DNA (726bp) protein (242aa)
ABC-type enterochelin transport system, ATPase component (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FSX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Displaying 23 items

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