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L2_022_366G1_scaffold_555

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_555_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..738)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG02245.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_366G1_scaffold_555_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(728..2974)
DNA (2247bp) protein (749aa)
ABC transporter family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D8P6_CLODI
ABC transporter family protein {ECO:0000313|EMBL:EQF24279.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ABC transporter ATP-binding protein/permease
L2_022_366G1_scaffold_555_3
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2990..3613)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI00031FDFB1
Uncharacterized protein {ECO:0000313|EMBL:EJS76634.1}; TaxID=1053181 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-3.;"
TetR family transcriptional regulator
L2_022_366G1_scaffold_555_4
unknown

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comp(3781..3975)
DNA (195bp) protein (65aa)

This feature has no annotations

L2_022_366G1_scaffold_555_5
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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comp(4050..5729)
DNA (1680bp) protein (560aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
fhs; Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JDP2_9FIRM
L2_022_366G1_scaffold_555_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5763..6200)
DNA (438bp) protein (146aa)
UPF0178 protein CBDKU1_27660 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAB0_CLOBU
UPF0178 protein A500_00795 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein DUF188
L2_022_366G1_scaffold_555_7
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6200..6811)
DNA (612bp) protein (204aa)
PAP2 family protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LS83_9CLOT
PAP2 family protein {ECO:0000313|EMBL:CDE90212.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L2_022_366G1_scaffold_555_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6856..8199)
DNA (1344bp) protein (448aa)
Radical SAM domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N4Y1_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDS18733.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
radical SAM-superfamily protein
L2_022_366G1_scaffold_555_9
unknown

Not on your lists

comp(8275..8793)
DNA (519bp) protein (173aa)

This feature has no annotations

L2_022_366G1_scaffold_555_10
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8852..9454)
DNA (603bp) protein (201aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6CY66_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDA80550.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
hypothetical protein
L2_022_366G1_scaffold_555_11
Clostridium sp. CAG:524, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9511..10761)
DNA (1251bp) protein (417aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. CAG:524 RepID=R6BHB9_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDA60164.1}; TaxID=1262817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:524.;"
L2_022_366G1_scaffold_555_12
unknown

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comp(10823..11425)
DNA (603bp) protein (201aa)

This feature has no annotations

L2_022_366G1_scaffold_555_13
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11473..11829)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EXS0_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI97856.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L2_022_366G1_scaffold_555_14
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12104..12607)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:710 RepID=R5T9D0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59809.1}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
exported protein of unknown function
L2_022_366G1_scaffold_555_15
unknown

Not on your lists

comp(12641..13504)
DNA (864bp) protein (288aa)

This feature has no annotations

L2_022_366G1_scaffold_555_16
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(13587..14672)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IWJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46435.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
L2_022_366G1_scaffold_555_17
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14682..15848)
DNA (1167bp) protein (389aa)
Peptidase S26B signal peptidase n=1 Tax=Clostridium sp. CAG:710 RepID=R5TI26_9CLOT
Peptidase S26B signal peptidase {ECO:0000313|EMBL:CCZ58646.1}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
signal peptidase I
L2_022_366G1_scaffold_555_18
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(15922..16431)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46442.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
exported protein of unknown function
L2_022_366G1_scaffold_555_19
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(16462..16974)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46442.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
exported protein of unknown function
L2_022_366G1_scaffold_555_20
unknown

Not on your lists

comp(17051..17521)
DNA (471bp) protein (157aa)

This feature has no annotations

L2_022_366G1_scaffold_555_21
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(17573..18349)
DNA (777bp) protein (259aa)
Oxidoreductase short chain dehydrogenase/reductase family n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JD55_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family {ECO:0000313|EMBL:CCY46926.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
short-chain dehydrogenase/reductase SDR
L2_022_366G1_scaffold_555_22
unknown

Not on your lists

18512..19066
DNA (555bp) protein (185aa)

This feature has no annotations

L2_022_366G1_scaffold_555_23
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19198..19935)
DNA (738bp) protein (246aa)
Transposase IS4 family protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDN4_9CLOT
Transposase IS4 family protein {ECO:0000313|EMBL:CDE98496.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
transposase DDE domain protein
L2_022_366G1_scaffold_555_24
Clostridium sp. CAG:628, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20022..20354)
DNA (333bp) protein (111aa)
Transposase IS4 family protein n=1 Tax=Clostridium sp. CAG:628 RepID=R7MDN4_9CLOT
Transposase IS4 family protein {ECO:0000313|EMBL:CDE98496.1}; TaxID=1262829 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:628.;"
transposase
Displaying 24 items

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