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L2_022_366G1_scaffold_563

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_563_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1257)
DNA (1257bp) protein (419aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM47_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEA82904.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_563_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1442..1993)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM46_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82903.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC transporter permease
L2_022_366G1_scaffold_563_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1990..3615)
DNA (1626bp) protein (542aa)
Glycosidases (EC:3.2.1.70)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM45_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82902.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_366G1_scaffold_563_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3617..5380)
DNA (1764bp) protein (588aa)
Alpha amylase, catalytic domain protein n=2 Tax=Clostridium RepID=B6FM44_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEA82901.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycosidase
L2_022_366G1_scaffold_563_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5398..6849)
DNA (1452bp) protein (484aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=2 Tax=Clostridium RepID=B6FM43_9CLOT
L2_022_366G1_scaffold_563_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6863..9124)
DNA (2262bp) protein (754aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphorylase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PE12_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L2_022_366G1_scaffold_563_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9129..11072)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMX5_9FIRM
Putative glycogen debranching enzyme, archaeal type {ECO:0000313|EMBL:EEA82898.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
glycogen debranching protein
L2_022_366G1_scaffold_563_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11077..11904)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22560.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pullulanase, type I
L2_022_366G1_scaffold_563_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11880..13001)
DNA (1122bp) protein (374aa)
Pullulanase, type I {ECO:0000313|EMBL:EEA82897.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EEA82897.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Pullulanase, type I n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM40_9CLOT
pullulanase, type I
L2_022_366G1_scaffold_563_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13017..13889)
DNA (873bp) protein (291aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM39_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82896.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_022_366G1_scaffold_563_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14027..15268)
DNA (1242bp) protein (414aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=B6FM38_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA82895.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
maltose/maltodextrin transport system permease
L2_022_366G1_scaffold_563_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15284..16525)
DNA (1242bp) protein (414aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM37_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEA82894.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_022_366G1_scaffold_563_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16772..17773
DNA (1002bp) protein (334aa)
Transcriptional regulators (EC:5.1.1.1)
Transcriptional regulator, LacI family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM36_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEA82893.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_022_366G1_scaffold_563_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18835..19314)
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGL8_9CLOT
phosphoesterase, MJ0936 family
L2_022_366G1_scaffold_563_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19311..19910)
DNA (600bp) protein (200aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=Clostridium RepID=B6FM33_9CLOT
L2_022_366G1_scaffold_563_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19926..20102)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FM32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82889.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted N6-adenine-specific DNA methylase
Displaying 16 items

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