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L2_022_366G1_scaffold_570

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_570_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..370
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39559.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_022_366G1_scaffold_570_2

Not on your lists

415..801
DNA (387bp) protein (129aa)
Uncharacterized protein n=10 Tax=root RepID=A7VCV1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC78360.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_022_366G1_scaffold_570_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

755..3148
DNA (2394bp) protein (798aa)
TraE protein n=1 Tax=Enterococcus faecalis BM4654 RepID=U7SA22_ENTFL
TraE protein {ECO:0000313|EMBL:ERT29164.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
hypothetical protein
L2_022_366G1_scaffold_570_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3428..5095
DNA (1668bp) protein (556aa)
NlpC/P60 family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FW22_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEG93186.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L2_022_366G1_scaffold_570_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5118..5384
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMB3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94039.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_022_366G1_scaffold_570_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5371..6018
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GMB2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94038.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_022_366G1_scaffold_570_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6021..6212
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUX9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41621.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_022_366G1_scaffold_570_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6213..6614
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEP4_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74560.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_022_366G1_scaffold_570_9
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6747..7337
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7VCU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG93181.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_022_366G1_scaffold_570_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7350..7532
DNA (183bp) protein (61aa)
Uncharacterized protein n=9 Tax=root RepID=C0FW16_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGA94034.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_022_366G1_scaffold_570_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7532..7873
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VCT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP20518.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_022_366G1_scaffold_570_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8049..8339
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7VCT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG93178.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_022_366G1_scaffold_570_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8419..9834
DNA (1416bp) protein (472aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCT6_9CLOT
RLX protein {ECO:0000313|EMBL:KJF39570.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_022_366G1_scaffold_570_14
unknown

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9839..10093
DNA (255bp) protein (85aa)

This feature has no annotations

L2_022_366G1_scaffold_570_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10004..10363)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM21_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFQ05787.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Helix-turn-helix.
L2_022_366G1_scaffold_570_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10517..10705
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VCT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFQ05786.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_366G1_scaffold_570_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10698..11399
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM19_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ05785.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_022_366G1_scaffold_570_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11402..12325
DNA (924bp) protein (308aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCT2_9CLOT
Signal transduction histidine kinase
L2_022_366G1_scaffold_570_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12418..13185
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VCT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFQ05783.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_366G1_scaffold_570_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13198..13623
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4L9A5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25845.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_022_366G1_scaffold_570_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13641..14564
DNA (924bp) protein (308aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM15_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFQ05781.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ABC-type multidrug transport system, ATPase component
L2_022_366G1_scaffold_570_22
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14557..15288
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58675.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L2_022_366G1_scaffold_570_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15299..16033
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7VCS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFQ05779.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_022_366G1_scaffold_570_24
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16500..16922
DNA (423bp) protein (141aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=4 Tax=Firmicutes RepID=D4MKZ5_9FIRM
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS44228.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_022_366G1_scaffold_570_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..17633
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20507.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_022_366G1_scaffold_570_26
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17767..17943
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=T4S2A1_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERT29192.1}; TaxID=1391469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis BM4654.;"
L2_022_366G1_scaffold_570_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18033..19541
DNA (1509bp) protein (503aa)
Recombinase family protein n=1 Tax=Clostridium difficile P51 RepID=T4S1Y8_CLODI
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDP20505.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Site-specific recombinases, DNA invertase Pin homologs
Displaying 27 items

View Taxonomy