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L2_022_366G1_scaffold_605

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_605_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..192)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WTI8_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJZ62713.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L2_022_366G1_scaffold_605_2
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(332..2032)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB52605.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L2_022_366G1_scaffold_605_3
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2170..3870)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A1K1_9PORP
hypothetical protein
Tax=CG_Ignavi_02
L2_022_366G1_scaffold_605_4
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4009..5715)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDA1_9PORP
hypothetical protein
Tax=CG_Ignavi_02
L2_022_366G1_scaffold_605_5
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5992..6351
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBC6_9PORP
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L2_022_366G1_scaffold_605_6
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6391..8421
DNA (2031bp) protein (677aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Tannerella sp. CAG:118 RepID=R5IRK7_9PORP
cell division protein FtsH
L2_022_366G1_scaffold_605_7
unknown

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comp(8597..8689)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_022_366G1_scaffold_605_8
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8718..9581
DNA (864bp) protein (288aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
Phosphatidate cytidylyltransferase n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YJU4_9BACE
phosphatidate cytidylyltransferase
L2_022_366G1_scaffold_605_9
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

9578..10348
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030BA403
Cof-like hydrolase {ECO:0000313|EMBL:EES65107.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
Cof-like hydrolase
L2_022_366G1_scaffold_605_10
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10445..10750)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DCK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL80506.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
L2_022_366G1_scaffold_605_11
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10734..11291)
DNA (558bp) protein (186aa)
RNA polymerase sigma factor n=3 Tax=Porphyromonadaceae RepID=G9S8P5_9PORP
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
RNA polymerase, sigma-24 subunit, RpoE
L2_022_366G1_scaffold_605_12
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11269..11823)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CIQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL80508.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
hypothetical protein
L2_022_366G1_scaffold_605_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11976..13661)
DNA (1686bp) protein (562aa)
ChvD family ATP-binding cassette protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESH2_9BACE
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:CCX95625.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
heme ABC transporter ATP-binding protein
L2_022_366G1_scaffold_605_14
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13776..14333)
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
Peptide deformylase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EWE0_9BACE
peptide deformylase
L2_022_366G1_scaffold_605_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14348..14761)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Putative Holliday junction resolvase n=2 Tax=Bacteroidales RepID=R5ESV2_9BACE
Holliday junction resolvase
L2_022_366G1_scaffold_605_16
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14850..16628)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EGN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU90122.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
putative mechano-sensitive ion channel
L2_022_366G1_scaffold_605_17
unknown

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comp(16877..17263)
DNA (387bp) protein (129aa)

This feature has no annotations

L2_022_366G1_scaffold_605_18
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18136..18498)
DNA (363bp) protein (121aa)
id=1742251 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
L2_022_366G1_scaffold_605_19
unknown

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comp(18539..18709)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 19 items

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