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L2_022_366G1_scaffold_621

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_621_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154..852)
DNA (699bp) protein (233aa)
nrdG; ribonucleoside-triphosphate reductase-like protein (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=2 Tax=Clostridium RepID=B6FRR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22209.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_621_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1141..1392
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PD25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22208.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_621_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1417..2454
DNA (1038bp) protein (346aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=2 Tax=Clostridium RepID=B6FRR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22207.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_621_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2567..3988
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=2 Tax=Clostridium RepID=B6FRR2_9CLOT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEA81349.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
iron-only hydrogenase maturation protein HydG
L2_022_366G1_scaffold_621_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3999..5189
DNA (1191bp) protein (397aa)
Hydrogenase maturation GTPase HydF n=2 Tax=Clostridium RepID=B6FRR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22205.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
small GTP-binding protein
L2_022_366G1_scaffold_621_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5242..5931)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22204.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_621_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5946..7484)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22203.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_621_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7681..8349
DNA (669bp) protein (223aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EEA81345.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEA81345.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=2 Tax=Clostridium RepID=B6FRQ8_9CLOT
L2_022_366G1_scaffold_621_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8361..9233
DNA (873bp) protein (291aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEA81344.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEA81344.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=2 Tax=Clostridium RepID=B6FRQ7_9CLOT
L2_022_366G1_scaffold_621_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9293..10648)
DNA (1356bp) protein (452aa)
DNA repair protein radA n=2 Tax=Clostridium RepID=B6FRQ6_9CLOT
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA repair protein RadA
L2_022_366G1_scaffold_621_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10727..11140)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81342.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_621_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11206..13650)
DNA (2445bp) protein (815aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRQ4_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEA81341.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ATPases with chaperone activity, ATP-binding subunit
L2_022_366G1_scaffold_621_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13668..14036)
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=B6FRQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22197.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GntR family transcriptional regulator
L2_022_366G1_scaffold_621_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14188..15459)
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=2 Tax=Clostridium RepID=B6FRQ2_9CLOT
L2_022_366G1_scaffold_621_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15469..16101)
DNA (633bp) protein (211aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=2 Tax=Clostridium RepID=B6FRQ1_9CLOT
L2_022_366G1_scaffold_621_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16095..17120)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PMW8_9CLOT
PurM; phosphoribosylaminoimidazole synthetase
L2_022_366G1_scaffold_621_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17143..17655)
DNA (513bp) protein (171aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Clostridium RepID=B6FRP9_9CLOT
L2_022_366G1_scaffold_621_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17811..18236)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FRP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22192.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Leucyl aminopeptidase (aminopeptidase T)
Displaying 18 items

View Taxonomy