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L2_022_366G1_scaffold_645

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_645_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(431..1297)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77195.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L2_022_366G1_scaffold_645_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1434..2825
DNA (1392bp) protein (464aa)
Transporter n=2 Tax=Ruminococcus RepID=C6JCN7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Na+-dependent transporters of the SNF family
L2_022_366G1_scaffold_645_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2944..3609)
DNA (666bp) protein (222aa)
HAD hydrolase, family IA n=2 Tax=Ruminococcus RepID=C6JCN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77193.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HAD superfamily hydrolase
L2_022_366G1_scaffold_645_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3724..4953)
DNA (1230bp) protein (410aa)
DNA repair protein radA n=2 Tax=Ruminococcus RepID=C6JCN9_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA repair protein RadA
L2_022_366G1_scaffold_645_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5094..5507)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77190.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_366G1_scaffold_645_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5737..8199)
DNA (2463bp) protein (821aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCP1_9FIRM
ATPase AAA-2 domain-containing protein {ECO:0000313|EMBL:CDD77188.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPases with chaperone activity, ATP-binding subunit
L2_022_366G1_scaffold_645_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8208..8585)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77186.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, GntR family
L2_022_366G1_scaffold_645_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8765..9535)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77184.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_366G1_scaffold_645_9
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9540..10262)
DNA (723bp) protein (241aa)
DNA alkylation repair enzyme n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DXD7_9BACL
DNA alkylation repair enzyme {ECO:0000313|EMBL:EGQ20849.1}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcina newyorkensis 2681.;"
hypothetical protein
L2_022_366G1_scaffold_645_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10578..11852)
DNA (1275bp) protein (425aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCP4_9FIRM
L2_022_366G1_scaffold_645_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11878..12519)
DNA (642bp) protein (214aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCP5_9FIRM
L2_022_366G1_scaffold_645_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12513..13538)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Ruminococcus RepID=C6JCP6_9FIRM
L2_022_366G1_scaffold_645_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13588..14088)
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Ruminococcus RepID=C6JCP7_9FIRM
L2_022_366G1_scaffold_645_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14322..16355)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77175.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Leucyl aminopeptidase (aminopeptidase T)
L2_022_366G1_scaffold_645_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16394..16714)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77174.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_022_366G1_scaffold_645_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16698..17171)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77172.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
VanZ family protein
L2_022_366G1_scaffold_645_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17197..17346)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77171.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying 17 items

View Taxonomy