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L2_022_366G1_scaffold_705

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_705_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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285..869
DNA (585bp) protein (195aa)
50S ribosomal protein L25 n=2 Tax=Clostridium RepID=B6FP66_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
LSU ribosomal protein L25P
L2_022_366G1_scaffold_705_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(887..1267)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82172.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_022_366G1_scaffold_705_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1242..2660)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PMN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22099.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_705_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2663..3055)
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22100.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GntR family transcriptional regulator
L2_022_366G1_scaffold_705_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3181..3918)
DNA (738bp) protein (246aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP71_9CLOT
L2_022_366G1_scaffold_705_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4010..4648)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FP72_9CLOT
L2_022_366G1_scaffold_705_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4645..5727)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=B6FP77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22103.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_705_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5699..5872)
DNA (174bp) protein (58aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP78_9CLOT
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EEA82159.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Nucleotidyltransferase domain.
L2_022_366G1_scaffold_705_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6029..6313)
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82160.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Uncharacterized protein conserved in bacteria (DUF2325).
L2_022_366G1_scaffold_705_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6375..6803)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22107.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
flavodoxin
L2_022_366G1_scaffold_705_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6816..7433)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PCT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22108.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_705_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7605..8066
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PMP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22109.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transcriptional regulator, MarR family
L2_022_366G1_scaffold_705_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8047..9420
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FP83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82164.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
MATE efflux family protein
L2_022_366G1_scaffold_705_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9456..11114)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PUE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22111.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type multidrug transport system, ATPase and permease components
L2_022_366G1_scaffold_705_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11107..12849)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QJJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22112.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
L2_022_366G1_scaffold_705_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12839..13045)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22113.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_705_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13056..13388)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22114.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_705_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13621..13845
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22115.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_022_366G1_scaffold_705_19
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14291..15973)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YMS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63430.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L2_022_366G1_scaffold_705_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16200..16802)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23037.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_022_366G1_scaffold_705_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16824..17357)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FP95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23038.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Displaying 21 items

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