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L2_022_366G1_scaffold_741

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_022_366G1_scaffold_741_1
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(178..363)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=14 Tax=Bifidobacteriaceae RepID=RS14Z_BIFAA
30S ribosomal protein S14-1
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
L2_022_366G1_scaffold_741_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(365..937)
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=2 Tax=Bifidobacterium RepID=B6XWU9_9BIFI
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_022_366G1_scaffold_741_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(934..1269)
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=5 Tax=Bacteria RepID=RL24_BIFAA
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_022_366G1_scaffold_741_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1271..1639)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=5 Tax=Bacteria RepID=RL14_BIFAA
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_022_366G1_scaffold_741_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1731..1991)
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NVC8_9BIFI
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S17
L2_022_366G1_scaffold_741_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1991..2248)
DNA (258bp) protein (86aa)
50S ribosomal protein L29 n=2 Tax=Bifidobacterium RepID=B6XWV3_9BIFI
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_022_366G1_scaffold_741_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2248..2667)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=5 Tax=Bacteria RepID=RL16_BIFAA
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_022_366G1_scaffold_741_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2676..3479)
DNA (804bp) protein (268aa)
30S ribosomal protein S3 n=1 Tax=uncultured bacterium RepID=S6CPE7_9BACT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S3
L2_022_366G1_scaffold_741_9
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3482..3841)
DNA (360bp) protein (120aa)
50S ribosomal protein L22 n=5 Tax=Bacteria RepID=RL22_BIFAA
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L2_022_366G1_scaffold_741_10
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3858..4136)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=11 Tax=root RepID=RS19_BIFAA
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L2_022_366G1_scaffold_741_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4152..4982)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=3 Tax=Bifidobacterium RepID=B6XWV8_9BIFI
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
50S ribosomal protein L2
L2_022_366G1_scaffold_741_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5019..5315)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=10 Tax=Bacteria RepID=A1A071_BIFAA
50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L2_022_366G1_scaffold_741_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5321..5986)
DNA (666bp) protein (222aa)
50S ribosomal protein L4 n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NRE6_9BIFI
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L2_022_366G1_scaffold_741_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5993..6634)
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=3 Tax=Bifidobacterium RepID=B6XWW1_9BIFI
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rplC; 50S ribosomal protein L3
L2_022_366G1_scaffold_741_15
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6652..6960)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=41 Tax=Bacteria RepID=D2Q8G9_BIFDB
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1261060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7672.;"
L2_022_366G1_scaffold_741_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7438..10167)
DNA (2730bp) protein (910aa)
Aldehyde dehydrogenase (NAD) family protein n=2 Tax=Bifidobacterium RepID=C0BQI3_9BIFI
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
acetaldehyde dehydrogenase
L2_022_366G1_scaffold_741_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10521..11492)
DNA (972bp) protein (324aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium RepID=C0BQI4_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR03012.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG71747.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
transcriptional regulator
L2_022_366G1_scaffold_741_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11532..12572)
DNA (1041bp) protein (347aa)
GroES-like protein n=2 Tax=Bifidobacterium RepID=C0BQI5_9BIFI
Sulfurtransferase {ECO:0000313|EMBL:KEF28894.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
xylitol (sorbitol) dehydrogenase
L2_022_366G1_scaffold_741_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12646..13977)
DNA (1332bp) protein (444aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQI6_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEG71749.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rbtT; hypothetical protein
L2_022_366G1_scaffold_741_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14132..15259
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU36_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR03009.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
NagC family transcriptional regulator
L2_022_366G1_scaffold_741_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15381..15782)
DNA (402bp) protein (134aa)
Glyoxalase family protein n=2 Tax=Bifidobacterium RepID=C0BQI8_9BIFI
Glyoxalase family protein {ECO:0000313|EMBL:EEG71751.1}; Lyase {ECO:0000313|EMBL:BAR03008.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_022_366G1_scaffold_741_22
unknown

Not on your lists

comp(15843..16334)
DNA (492bp) protein (164aa)
cytochrome C biogenesis protein CcdA
Displaying 22 items

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