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L2_022_366G1_public_UNK

In projects: L2_022_366G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 44.61 Longest contig: 384.01 Kbp Bin length: 66.20 Mbp GC content: 47.26 %
Contigs count: 14240 Features count: 72710 rRNAs count: 20 tRNAs count: 1010

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Displaying items 351-400 of 14240 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L2_022_366G1_scaffold_13430
Species: Peptoclostridium difficile (66.67%)
3 1048 bp 46.56 5.58 100.48
L2_022_366G1_scaffold_13366
Species: Roseburia intestinalis (100%)
2 1051 bp 45.67 2.85 100.48
L2_022_366G1_scaffold_8693
Species: [Ruminococcus] gnavus (50%)
2 1472 bp 55.50 21.20 100.48
L2_022_366G1_scaffold_13155
Species: Clostridium sp. HGF2 (50%)
2 1066 bp 48.69 4.50 100.47
L2_022_366G1_scaffold_7168
Species: Clostridium sp. CAG:91 (50%)
2 1708 bp 49.77 3.69 100.47
L2_022_366G1_scaffold_12920
Species: Clostridium sp. CAG:411 (50%)
2 1081 bp 41.63 3.33 100.46
L2_022_366G1_scaffold_10192
Species: Erysipelotrichaceae bacterium 6_1_45 (50%)
2 1302 bp 40.55 3.23 100.46
L2_022_366G1_scaffold_12846
Species: Klebsiella variicola CAG:634 (50%)
2 1087 bp 64.40 4.42 100.46
L2_022_366G1_scaffold_3822
Species: Ruminococcus gnavus CAG:126 (50%)
2 2831 bp 46.91 10.81 100.46
L2_022_366G1_scaffold_10128
Species: Anaerotruncus colihominis (100%)
3 1308 bp 61.39 3.44 100.46
L2_022_366G1_scaffold_3891
Species: Ruminococcus gnavus CAG:126 (66.67%)
6 3927 bp 42.86 7.91 100.46
L2_022_366G1_scaffold_5988
Species: Ruminococcaceae bacterium D16 (75%)
4 1968 bp 68.95 6.40 100.46
L2_022_366G1_scaffold_12726
Species: Clostridium sp. CAG:352 (50%)
2 1096 bp 41.61 4.65 100.46
L2_022_366G1_scaffold_5141
Species: Coprobacillus sp. 3_3_56FAA (100%)
2 2219 bp 35.83 4.53 100.45
L2_022_366G1_scaffold_5836
Species: Erysipelotrichaceae bacterium CAG:64 (50%)
2 2007 bp 50.22 5.83 100.45
L2_022_366G1_scaffold_8040
Species: Anaerotruncus colihominis (100%)
3 1562 bp 61.08 4.99 100.45
L2_022_366G1_scaffold_9780
Species: Ruminococcus gnavus CAG:126 (50%)
2 1344 bp 47.32 3.79 100.45
L2_022_366G1_scaffold_5097
Species: Ruminococcus sp. 5_1_39BFAA (50%)
4 2240 bp 42.50 16.41 100.45
L2_022_366G1_scaffold_12241
Species: [Clostridium] spiroforme (50%)
2 1129 bp 29.85 3.99 100.44
L2_022_366G1_scaffold_5684
Species: Anaerotruncus colihominis (100%)
2 2055 bp 44.38 4.38 100.44
L2_022_366G1_scaffold_9524
Species: Bifidobacterium pseudocatenulatum (100%)
2 1371 bp 59.59 4.49 100.44
L2_022_366G1_scaffold_9531
Species: Roseburia hominis (100%)
3 1371 bp 41.87 4.38 100.44
L2_022_366G1_scaffold_3575
Species: Clostridium sp. CAG:7 (75%)
4 2993 bp 52.76 4.16 100.43
L2_022_366G1_scaffold_9382
Species: Tyzzerella nexilis (50%)
2 1389 bp 38.16 8.86 100.43
L2_022_366G1_scaffold_7655
Species: Klebsiella variicola CAG:634 (50%)
2 1625 bp 60.62 5.54 100.43
L2_022_366G1_scaffold_7623
Species: Anaerotruncus colihominis (100%)
2 1631 bp 57.69 5.52 100.43
L2_022_366G1_scaffold_3199
Order: Clostridiales (80%)
5 3304 bp 33.60 5.81 100.42
L2_022_366G1_scaffold_11519
Species: Ruminococcaceae bacterium D16 (66.67%)
3 1183 bp 63.48 7.23 100.42
L2_022_366G1_scaffold_7454
Species: Firmicutes bacterium CAG:65 (100%)
2 1658 bp 50.18 4.89 100.42
L2_022_366G1_scaffold_7386
Species: Erysipelotrichaceae bacterium CAG:64 (66.67%)
3 1670 bp 42.99 3.23 100.42
L2_022_366G1_scaffold_11332
Species: Eubacterium dolichum CAG:375 (50%)
2 1198 bp 29.97 4.01 100.42
L2_022_366G1_scaffold_13814
Species: Subdoligranulum sp. 4_3_54A2FAA (100%)
2 1025 bp 61.27 4.83 100.39
L2_022_366G1_scaffold_13753
Species: Klebsiella pneumoniae (50%)
2 1028 bp 59.44 5.25 100.39
L2_022_366G1_scaffold_8163
Species: Bifidobacterium sp. 12_1_47BFAA (100%)
3 1542 bp 64.33 10.31 100.39
L2_022_366G1_scaffold_13650
Species: Clostridium sp. CAG:91 (50%)
2 1034 bp 53.48 6.53 100.39
L2_022_366G1_scaffold_10152
Species: Clostridium sp. HGF2 (50%)
2 1306 bp 51.91 5.17 100.38
L2_022_366G1_scaffold_10157
Genus: Clostridium (100%)
3 1306 bp 55.51 5.17 100.38
L2_022_366G1_scaffold_5534
Species: Clostridium sp. CAG:914 (50%)
2 2098 bp 35.03 5.22 100.38
L2_022_366G1_scaffold_13407
Species: Firmicutes bacterium CAG:65 (100%)
2 1049 bp 41.56 4.58 100.38
L2_022_366G1_scaffold_4703
Species: Anaerostipes sp. CAG:276 (100%)
2 2394 bp 49.79 2.76 100.38
L2_022_366G1_scaffold_5409
Species: [Clostridium] innocuum (66.67%)
3 2137 bp 38.61 4.49 100.37
L2_022_366G1_scaffold_7747
Species: Anaerotruncus colihominis (100%)
2 1608 bp 61.32 3.82 100.37
L2_022_366G1_scaffold_7730
Species: Klebsiella variicola (50%)
2 1611 bp 67.23 4.10 100.37
L2_022_366G1_scaffold_9680
Species: Lachnospiraceae bacterium 6_1_37FAA (66.67%)
3 1354 bp 50.00 3.10 100.37
L2_022_366G1_scaffold_9623
Species: [Clostridium] spiroforme (100%)
3 1360 bp 28.01 3.20 100.37
L2_022_366G1_scaffold_12838
Species: Klebsiella pneumoniae (50%)
2 1088 bp 60.29 4.14 100.37
L2_022_366G1_scaffold_4000
Species: Roseburia sp. CAG:18 (50%)
2 2723 bp 49.28 6.83 100.37
L2_022_366G1_scaffold_9598
Species: Anaerotruncus colihominis (100%)
2 1363 bp 60.97 4.18 100.37
L2_022_366G1_scaffold_7558
Species: Oscillibacter sp. CAG:155 (50%)
2 1641 bp 61.30 4.94 100.37
L2_022_366G1_scaffold_9459 3 1381 bp 30.49 4.67 100.36
Displaying items 351-400 of 14240 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.